Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0626 ATGATGGCTACTCCAACTAAACCAATGGCCGTAATGTTGTCTGAATCTTTGGAACACAAGGGAAAGGATATCACTGAATTAAATGGTAACATACTTCAATCCCCTATAAGTCAACAGCCCCATAGCTCCTCTGATGGTTCAGTAGCTATTCTTTGGGACATTGAAAACTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGACGTAGCAGGAAATATAAGGATGGCGTTGCAAGTGCATCCAGTAATTCAAGGAACTGTTATGGTATTTTCTGCTTATGGTGACTTCAACGCTTTCCCTAAGCGACTTAGAGAGGGATGTCTAAGAACTGGTGTTAATCTCATTGATGTTCCTAATGGGAGAAAAGATGCTGCTGATAAAGCAATCTTGGTTGACATGTTTTTATTTGCTCTTGACAACCCTCCCCCATCATCTATTATGCTAATATCTGGAGACGTTGACTTTGCCCGAGCACTTCACATTCTTGGACAACGGGGATACACTATAATTCTTGTCATCCCTTCTGGGGTGGGTGTTTCATCTGCTTTATGCAATGCTGGAAAGTTTGTCTGGGATTGGCCTAGCGTTGCTCGTGGAGAAGGATTTGTTCCCCCGGCAAAGGCTTTAGTACCACCTCGTGGAGGTTCAGTTGAGGTTGCTGGATATTTGATGGGGTGCCATATTAATGACAACTTCGAGGGACAAAATGAGGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGATTATATAACTCAAGGGATTTCTCTATGGTTTCACAATCTCTATCTGAATACAATTGTACCGCATCGAACATGGCTGGCTTACCGACAACTATGAGATCACACAGCCTTCCACCTGGGATGATTGATGTTTCAGGAATATCTATGCCTTCTAGTGACAATAATGAAGGCCAGCTTTGGGGCCCTATGTCTAGCGATTTAAATGTTCTCAAAGGCCACTTGGTAAAGTTGCTTGAACTTTCTGGAGGGTGCCTGCCTCTGGCTCGAGTTCCAACAGAGTATCAGAAAGCTTATGGAAGAACTCTTTATGTATCTGATTATGGAGCAATTAAGTTAGTCAATCTTTTCAAGAAGATGGGTGATACAGTGGCAGTGGAAGGGAAAGGTCAACGTAAATTTGTGTATCTCAGAAACTTCAAGGTAGGCCCGAGCGCTCCCCCATTGGCTCTAGCAAAGAAAGACAAGAAAGGAAAGGGGCTTCCAGAAGAAAATACGAATACTGTCACCGGTGGTGGCTCTTCAGATGAGTTCTCAGATGAAGAAAGACTAGTCATGGAAGAACATGACGAGAGAAATTGTGTAGGAAAGGGCAGTCAAAGGAGAGCAGCTATCAATGACCGTGCTCTTGAGCAGTTCAAGTTCGAGCTTCAAGAGATTCTAGTCAGCTACTCGTGTCGAATATTCCTAGGTTGTTTTGAGGATATATACCAACAAAGGTACAAGAGACAATTGGAATATCAGAGACTTGGAGTGAACAAGTTGGAGGATTTGTTTGAGAAAGTCAATGATATTGTAGTATTGGTTGAGGAACCAGGAAGCAAGAGGAAGTTCCTTGCTCCAGTGGGGAGTTAG 1593 0.4325 MMATPTKPMAVMLSESLEHKGKDITELNGNILQSPISQQPHSSSDGSVAILWDIENCPVPSDVRPEDVAGNIRMALQVHPVIQGTVMVFSAYGDFNAFPKRLREGCLRTGVNLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFARALHILGQRGYTIILVIPSGVGVSSALCNAGKFVWDWPSVARGEGFVPPAKALVPPRGGSVEVAGYLMGCHINDNFEGQNEEEAIVYRGMSQRLYNSRDFSMVSQSLSEYNCTASNMAGLPTTMRSHSLPPGMIDVSGISMPSSDNNEGQLWGPMSSDLNVLKGHLVKLLELSGGCLPLARVPTEYQKAYGRTLYVSDYGAIKLVNLFKKMGDTVAVEGKGQRKFVYLRNFKVGPSAPPLALAKKDKKGKGLPEENTNTVTGGGSSDEFSDEERLVMEEHDERNCVGKGSQRRAAINDRALEQFKFELQEILVSYSCRIFLGCFEDIYQQRYKRQLEYQRLGVNKLEDLFEKVNDIVVLVEEPGSKRKFLAPVGS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0626 530 CDD LOTUS 314 383 - -
Ahy2g0626 530 CDD PIN_limkain_b1_N_like 48 173 - -
Ahy2g0626 530 Pfam OST-HTH/LOTUS domain 456 520 IPR025605 -
Ahy2g0626 530 Pfam OST-HTH/LOTUS domain 316 380 IPR025605 -
Ahy2g0626 530 CDD LOTUS 456 519 - -
Ahy2g0626 530 ProSiteProfiles OST-type HTH domain profile. 313 385 IPR025605 -
Ahy2g0626 530 Gene3D - 311 382 IPR041966 -
Ahy2g0626 530 Gene3D - 451 524 IPR041966 -
Ahy2g0626 530 Pfam NYN domain 48 186 IPR021139 GO:0004540
Ahy2g0626 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Ahy2g0626 530 PANTHER LIMKAIN B LKAP 19 525 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy2g0626 530 MobiDBLite consensus disorder prediction 394 424 - -
Ahy2g0626 530 PANTHER - 19 525 - -
Ahy2g0626 530 Gene3D - 40 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0626 Ahy-Chr2 9683384 9686476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0626 46 198 C2H2 Transcription Factor Family AT5G61190 43.137 1.60e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0626 - - ahf:112715639 1021.54