Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0540 ATGAGTTTTGGAGGGTTTCTAGACAACAATTCCGGTGGCGGCGACGACGGTGGCGGTGGCGGCGGTGTGAGAAACATAGTAGAAATTCCATATAACAACGGTGGTGGTGGCACTACCAAGAACAACATCATCAACAACGATAATAATAGAACAACAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTTTTAACAACTACTCCAACTTTGGCCAAATCAATGTTCAACTCACCTGGCCTCTCTCTAGCACTTCAGCAAACGAATCTTGATGAACAAGGGGATGTGAATAACAACAACATTATGGGGAGTGAGAACAACAACAATAATTATGAAGGAAGTAATGGAGGATTGAGAAGGAGCAGAGAAGAAGAACATGAAAGCAGATCTGGAAGTGATAACATGGATGGTGCCTCCGGCGATGAACAAGATGCTGCCGACAACAATAATCCCAAAAGGAAAAAACGTTATCACCGACACACTCCTCAGCAAATACAAGAGCTTGAATCGTTGTTTAAGGAGTGTCCCCATCCTGACGAGAAACAAAGGCTAGAACTTAGTAAAAGGCTTTGCTTGGAAACAAGGCAGGTGAAGTTTTGGTTCCAAAATCGGAGAACCCAAATGAAGACTCAATTGGAGCGCCATGAGAACACACTCCTAAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCAATTAGAGATGCAATGAGGAACCCCATGTGTTCAAATTGTGGTGGTCCTGCCATAATTGGTGAGCTTTCACTTGAGGAACAACATCTTAGGATTGAGAATGCAAGACTAAAGGATGAATTAGACCGGGTTTGTGCCCTCGCCGGCAAGTTCTTGGGCCGGCCCATTTCGTCGATGGGCGGGCCCCATCCGTTGCCAAATTCAAGTTTGGAGCTTGGGGTTGGCAACAATAACAATGGCTATGGTTGCAACTTGAGCATAAATGTGCCTAATAGCTTGCCTTTGGGGCCGGAATTTGGGGTGAATTTGTCTAGTCCTTTGGGTATGGTTTCCGGGCCGGCGATCACTCGGCCACAGCCGAGCGCGGTTGTTGGCGGATTTGATAGGTCAATGGAGAGGTCAATGTTGTTGGAGCTTGGTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCACAAAGTTGTGAGCCTCTTTGGATAAGGAGTTTGGAAATTGGAGGAAGGGAAGTGCTTAACCATGAGGAGTATATTAGGACATTCCCTAATCCTTGCATTGCTTTAAGGACTAATTCCTTTGTCTCTGAGGCTTCTAGGGAAACTGGTCTTGTCATCATAAATAGCTTGGCTCTTGTTGAGACTTTAATGGATGCGAATCGATGGGCAGAGATGTTTCCTTGTATGATTGCAAGAACCTCAACCACTGAAGTGATATCCAATGGAATAAACGGTACCAGAAATGGTGCACTTCAACTAATGCATGCGGAGCTTCAAGTTCTATCGCCATTGGTACCAGTTAGAGAAGTGAATTTCCTTCGATTTTGCAAGCAACACGCAGAAGGGGTGTGGGCAGTGGTGGATGTCTCCATTGATGCTATCAGAGAAACTTCTTCTGCCGGTGCCCCAACTTTTGTTAATTGCAGAAGACTCCCTTCTGGCTGTATAGTACAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAACATGCCGAATACGAGGAAAGGGAAGTTCATCAGTTATATAGAGCCTTGTTGAGCTCTGGCATGGCCTTCGGCGCCCAGCGGTGGATCGCCACCCTACAGCGCCAGTGCGAGTGCCTCGCCATCCTCATGTCTTCTACTCAACCTTCTAGAGACCACTCAGCAATAACTGCAAGTGGTAGGCGCAGCATGCTGAAGCTGGCACAGAGGATGACCAACAACTTCTGTGCCGGAGTGTGCGCCTCCACGGTGCACAAGTGGAACAAGCTCAACAATACCGGCAACACTGTCGACGAGGATGTTAGGGTAATGACGAGGAAGAGCGTGGACGATCCTGGGGAGCCACCCGGGATCGTCCTCAGCGCTGCCACGTCAGTGTGGCTCCCAGTCTCGCCGCAGAGGCTGTTCGACTTCCTCCGCGACGAGAGGCTGAGGAGCGAGTGGGACATACTATCCAATGGTGGGCCCATGCAAGAGATGGCCCACATTGCAAAGGGACAGGACCATGGCAACTGCGTCTCCCTCCTTAGAGCCGGTGCAATAAATTCAAATCAAAGTAGCATGTTGATACTTCAAGAGACATGCATAGATGCTGCTGGCTCGCTTGTGGTGTACGCGCCGGTGGATATTCCGGCGATGCACGTGGTAATGAACGGTGGTGATTCTGCTTACGTGGCATTATTGCCTTCTGGGTTTGCGATTGTTCCGGATGGGCCTGCGCCTCGTGGGGCCCAAAATGGTGGCGCCGATGCCAACGGTGGCGATGACCTTGGTGGTGGGGCGCGTGGGAGTGGGTCCCTTTTGACGGTGGCATTTCAGATTCTTGTGAATAGTCTCCCTACGGCCAAGCTCACGGTAGAGTCGGTGGAAACTGTGAACAACCTCATTTCATGCACAGTTCAAAAGATAAAAGCAGCACTTCGGTGTGAAAGTTGA 2610 0.492 MSFGGFLDNNSGGGDDGGGGGGVRNIVEIPYNNGGGGTTKNNIINNDNNRTTMPSGAISQPRLLTTTPTLAKSMFNSPGLSLALQQTNLDEQGDVNNNNIMGSENNNNNYEGSNGGLRRSREEEHESRSGSDNMDGASGDEQDAADNNNPKRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGELSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSMGGPHPLPNSSLELGVGNNNNGYGCNLSINVPNSLPLGPEFGVNLSSPLGMVSGPAITRPQPSAVVGGFDRSMERSMLLELGLAAMDELVKMAQSCEPLWIRSLEIGGREVLNHEEYIRTFPNPCIALRTNSFVSEASRETGLVIINSLALVETLMDANRWAEMFPCMIARTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDAIRETSSAGAPTFVNCRRLPSGCIVQDMPNGYSKVTWVEHAEYEEREVHQLYRALLSSGMAFGAQRWIATLQRQCECLAILMSSTQPSRDHSAITASGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNTGNTVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRAGAINSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPAPRGAQNGGADANGGDDLGGGARGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALRCES* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0540 869 Gene3D - 431 596 IPR023393 -
Ahy2g0540 869 SUPERFAMILY Bet v1-like 625 862 - -
Ahy2g0540 869 ProSiteProfiles START domain profile. 360 600 IPR002913 GO:0008289
Ahy2g0540 869 MobiDBLite consensus disorder prediction 32 60 - -
Ahy2g0540 869 SMART START_1 369 597 IPR002913 GO:0008289
Ahy2g0540 869 Coils Coil 251 271 - -
Ahy2g0540 869 SUPERFAMILY Bet v1-like 361 597 - -
Ahy2g0540 869 Gene3D - 139 226 - -
Ahy2g0540 869 MobiDBLite consensus disorder prediction 92 160 - -
Ahy2g0540 869 MobiDBLite consensus disorder prediction 1 60 - -
Ahy2g0540 869 CDD START_ArGLABRA2_like 364 596 - -
Ahy2g0540 869 SUPERFAMILY Homeodomain-like 135 210 IPR009057 -
Ahy2g0540 869 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 106 866 IPR042160 -
Ahy2g0540 869 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 106 866 - -
Ahy2g0540 869 MobiDBLite consensus disorder prediction 116 131 - -
Ahy2g0540 869 SMART HOX_1 151 214 IPR001356 GO:0003677
Ahy2g0540 869 ProSitePatterns 'Homeobox' domain signature. 185 208 IPR017970 GO:0000981|GO:0006355
Ahy2g0540 869 ProSiteProfiles 'Homeobox' domain profile. 150 210 IPR001356 GO:0003677
Ahy2g0540 869 Pfam Homeodomain 153 208 IPR001356 GO:0003677
Ahy2g0540 869 CDD homeodomain 152 210 IPR001356 GO:0003677
Ahy2g0540 869 MobiDBLite consensus disorder prediction 92 115 - -
Ahy2g0540 869 Pfam START domain 372 597 IPR002913 GO:0008289
Ahy2g0540 869 Coils Coil 204 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0540 Ahy-Chr2 7725530 7734533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0540 1 869 Homeobox Transcription Factor Family AT3G61150 63.417 0.0 1029
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy2g0540 START 8.00E-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0540 K09338 - tcc:18614208 1264.21