Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0536 ATGGAAGCAATCTTGGTTCCTTCAGACATCCTATGTAGTGGTACTCCACTCACAGACCTCAGCAGAGAAGACACAATCTTGTTACCTGAAATCTTTTCTTCACTATCTGTGTCCCCTGAGCTATTTGACCAAATTTTACCTAACATAGTCGAAACTGCAAGAAGGTGTGACTCCAACACGCGGGAGATTGTTGTGAACCTTCATGTTACTTCGTACAATGTTGTTCAAGATTCTGATGAGCAAGATGATGATGCTGAATGCGCCATTTGTTTGGAGAAGTTTGACCATGGTAATGAAGATTCAAGTGTAGATATTGTTCGTACAAATTGCTCGCATGTTTTTCATAATCGCTGCTTACTCCCGTGGCTCCGATGCTGTGCCAACTGTGAGTCGCCACATTCTTGCCCATTGTGCCGCAGCATCCTATTTCCAACTTCAGAGATAGATGATGAATAG 456 0.4298 MEAILVPSDILCSGTPLTDLSREDTILLPEIFSSLSVSPELFDQILPNIVETARRCDSNTREIVVNLHVTSYNVVQDSDEQDDDAECAICLEKFDHGNEDSSVDIVRTNCSHVFHNRCLLPWLRCCANCESPHSCPLCRSILFPTSEIDDE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0536 151 SMART ring_2 87 138 IPR001841 -
Ahy2g0536 151 Pfam Ring finger domain 86 139 IPR001841 -
Ahy2g0536 151 SUPERFAMILY RING/U-box 74 145 - -
Ahy2g0536 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 144 IPR013083 -
Ahy2g0536 151 PANTHER RING ZINC FINGER PROTEIN-RELATED 61 147 - -
Ahy2g0536 151 ProSiteProfiles Zinc finger RING-type profile. 87 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0536 Ahy-Chr2 7645467 7645922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0536 87 143 C3H Transcription Factor Family AT4G12190 47.368 1.67e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0536 - K10664 ahf:112721229 316.62