Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0514 ATGAAAATGATTATGGAGGATGATGATATTGTTAGCAGGGAGGATGGTATCAAGGCAATAATCGAGGAGGAGCTTGTGAGAGGGCGTGACTTTGCCAATCAGCTAAGACAACGTATCGTCACCAATAAAGAAGATGATGACTCAGCTGATCATCAACGGCTTCTCAGTAACGTCCTCACCTCCTTCGCCAACACCCTCTCTCTCTTGAATAAATATCCCATACATCCAAATCCAATTCATCTTCACCAATCTTCTGCTTCTTCCCCTTCTTCCCATAATAGTGATCTTCTCATCATGCAAATGCTGCACCTGCAGATCCACCCTTGCTTGCTTACATATGACAACCACATTTGCAAGACCCCGCCGCCGGCGGACACAAGAGGCTCTTATCGGAGAAAAAGAAACATAGAGACATGGAAGAAGGAGACGGAGAATGAAAGAGAGGAGGATGGGCATCAATGGAGGAAGTACGGACAGAAGGCAATCCAGAATGAGAAATACACAAGGAACTACTTCCGATGCACTCACAAGTACGAACAGGGATGCAAAGCAACCAAGTATGTTCAGAGAATTCAAGAGAAGCCTCCGTTGTACAGGGCCACCTATCATGGTCGCCACACCTGCACCAACACAGACACTACTAATAACCACGTACTCATCATGGAGGAATTAGATCATCCTACTTCCTCCTCCTCCTCCATATTCCTCAGCTTTGACAACTCCTTCCCTAATCCACCAACCAATCCCTTTCTTTCACCATCTTCTTCTTCGCTTTTCCCCTCAACAGCACCGCCGCTACCTCCGATGATGATAATGGAAGAGGATCGGCAAGTTCTTCCCTCAACTACTTCAACCCACCCCGTTTTGGATGTTTCGTCAAGGCATCATGTGGTTCCTATATTATCATCGTCAGAAGATAATAATATTTGCTGGGATGATATGATGATGGCTGCCATGTCTCAAGTGTTATACGGTTCTGTTGATGAGGGATGA 993 0.4572 MKMIMEDDDIVSREDGIKAIIEEELVRGRDFANQLRQRIVTNKEDDDSADHQRLLSNVLTSFANTLSLLNKYPIHPNPIHLHQSSASSPSSHNSDLLIMQMLHLQIHPCLLTYDNHICKTPPPADTRGSYRRKRNIETWKKETENEREEDGHQWRKYGQKAIQNEKYTRNYFRCTHKYEQGCKATKYVQRIQEKPPLYRATYHGRHTCTNTDTTNNHVLIMEELDHPTSSSSSIFLSFDNSFPNPPTNPFLSPSSSSLFPSTAPPLPPMMIMEEDRQVLPSTTSTHPVLDVSSRHHVVPILSSSEDNNICWDDMMMAAMSQVLYGSVDEG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0514 330 SUPERFAMILY WRKY DNA-binding domain 145 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g0514 330 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 270 IPR044810 GO:0003700
Ahy2g0514 330 SMART WRKY_cls 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g0514 330 Gene3D WRKY domain 134 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g0514 330 ProSiteProfiles WRKY domain profile. 143 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g0514 330 Pfam WRKY DNA -binding domain 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g0514 330 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 22 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0514 Ahy-Chr2 7344190 7346061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0514 18 240 WRKY Transcription Factor Family AT3G56400 34.348 1.77e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy2g0514 WRKY 7.50E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0514 - - adu:107473290 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0613 12 9864706 9866432 Ahy2g0514 2 7344190 7346061 hybridization
Ahy14g2146 14 119912586 119915353 Ahy2g0514 2 7344190 7346061 PCT
Ahy4g1872 4 109322728 109325165 Ahy2g0514 2 7344190 7346061 PCT
Ahy2g0514 2 7344190 7346061 Ahy14g2146 14 119912586 119915353 PCT
Ahy2g0514 2 7344190 7346061 Ahy4g1872 4 109322728 109325165 PCT