Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0507 ATGTTGGACTACGAATGGGGGAACCCATCCATAATGCTCACCGGGAACGAAGACGGCGCAGCGCCACCGCCCTCCGACCAAACTCACCGCCAAATCTTCGACCACTACGCCTCTCACGCCCTACTGCCCGACCACTTCCTGCATGGGCCCGGCGCCACAACCACAGCTCACAATAACGCAAACAACCCCACCACCACCATCGACCTCTCTCATCATCACTTCAGCCCGCAACAAACCCATCACCACGTCCCCCACAGCTTCTTCGACCCACGGGCCTTCCATGCGGCCTCCTCCACCCACTACCCACCGCCACAGCCCCAACCCCCGCCTCCCCCATCCATGCTTTCCCTTGACCCGTTACCCCACCACGCCCACTGCGGGCCCGGCCATGGGCTCATGCTGGTGCCGAAATCTGAGGATGTCGGTCGGCCCATGGACTTCGTGGGCTCTCGAATTGGGCTGAACCTGGGAGGGCGCACCTACTTCTCGTCCTCGGAGGATGACTTCGTCAGCAGGCTGTACCGCAGGTCTCGGCCCGCCGAACCGGGGTCGACGGCGTCCTCTAACTCCCCTCGGTGCCAGGCGGAGGGGTGCAATGCTGATCTGTCTCAGGCGAAGCACTACCACCGCCGCCACAAAGTGTGCGAGTTCCACTCTAAGGCCTCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTTTGCCAACAATGCAGCAGGTTCCATCTTCTCTCTGAGTTCGATAACGGAAAACGTAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCCACCAGCACAAGACATCCACAAATCTCAGCCTGCTACTAATTTGGATAACGTTGCAAGGTCCCCACCGGAGTCCGGAGCTCAGTCATCTTCGTCCGTAACGGTGGCCGTGTCTCCACCTGATTACTTCCGGCAAAGGCCGTACCAAACCGGAAGCCCATCAACGACTTCAAGTTCACTGTTTTTCTCAAGCGGGCAGTAG 1008 0.5933 MLDYEWGNPSIMLTGNEDGAAPPPSDQTHRQIFDHYASHALLPDHFLHGPGATTTAHNNANNPTTTIDLSHHHFSPQQTHHHVPHSFFDPRAFHAASSTHYPPPQPQPPPPPSMLSLDPLPHHAHCGPGHGLMLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPPAQDIHKSQPATNLDNVARSPPESGAQSSSSVTVAVSPPDYFRQRPYQTGSPSTTSSSLFFSSGQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0507 335 ProSiteProfiles Zinc finger SBP-type profile. 190 267 IPR004333 GO:0003677
Ahy2g0507 335 SUPERFAMILY SBT domain 191 269 IPR036893 GO:0003677|GO:0005634
Ahy2g0507 335 MobiDBLite consensus disorder prediction 272 307 - -
Ahy2g0507 335 MobiDBLite consensus disorder prediction 256 335 - -
Ahy2g0507 335 MobiDBLite consensus disorder prediction 314 335 - -
Ahy2g0507 335 Gene3D - 183 254 IPR036893 GO:0003677|GO:0005634
Ahy2g0507 335 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 82 318 IPR044817 GO:0003677
Ahy2g0507 335 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 82 318 - -
Ahy2g0507 335 Pfam SBP domain 193 266 IPR004333 GO:0003677
Ahy2g0507 335 MobiDBLite consensus disorder prediction 1 26 - -
Ahy2g0507 335 MobiDBLite consensus disorder prediction 95 122 - -
Ahy2g0507 335 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0507 Ahy-Chr2 7143138 7146606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0507 1 240 SBP-box Gene Family AT1G02065 46.768 2.09e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy2g0507 SBP 4.60E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0507 - - adu:107473166 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0603 12 9658459 9662004 Ahy2g0507 2 7143138 7146606 hybridization
Ahy2g0507 2 7143138 7146606 Ahy14g1932 14 110871165 110872001 PCT
Ahy2g0507 2 7143138 7146606 Ahy4g1724 4 102297119 102297955 PCT