Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0491 ATGCATGGGAATAAGAGAAAGAAAGAGAGAGGGGATGAATTAGTAGATTACATAAGGAAAGGGCCATGGAAGAAAGAGGAAGATGAAGTGCTACTCAACCATGTAAGCAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGTCTTCTTCATAGAACCGGCAAGTCTTGTCGCCTTCGTTGGGTCAACAAGCTTCGACCTAACCTCAAGAATGGGTGCAAGTTTACAGCGGAGGAAGAGAGGGTTGTGATAGAATTGCAGGCACAATTTGGGAACAAATGGGCTAAGATTGCGTCCTATTTGAGTGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGGCAGAAGAGGCTTGCTAGGATTCTTCAGGCATCAACATCCACCTCCAAATCACACAGGAACAAACCTAAACTTCATCATCATCTTCCAACTTTCCAGGCTCCTAAATTGAGTTCTTCATCAGAGGGAGAATCGTCATCAAAGCCTCATCATCCATGCTCGTTCTCCTGCAATGACAATTCCGAGGTTATTAAAATGGTGGCATTACCAGATCTTATCAAGCCCAAGTTGCCTAATTCTGAGCAAGAAGAATCTGCACTTTTTGAGAGCAATAAAAGCAGTAGTATGATGGAACAAATTCCCTTCCCTCAGATTCCTGATGAACTCCAAACTGATCTAACACCATTCTCATTGGGAGACCAAGATCTTTTGACTAGAATTGATGATCCAAACTTTGCTGATTACTTTGGACCTCTTGGTGCATATGAGCTTGGGCTAGCCCCACAACACACCATTGGGTTCCCTTTCTCTGATCCATCAGAAGGAAGTTGCAGAATTGGGTCAACGGATATCATAGGTAGCTCCAAAAACTATGACAGCATCTTTGATGATCTCCCAGTTAACATGTTTGATCATATGGATCCACCTTCAATTCCTTCCAAGCTCTGA 960 0.4354 MHGNKRKKERGDELVDYIRKGPWKKEEDEVLLNHVSKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRPNLKNGCKFTAEEERVVIELQAQFGNKWAKIASYLSGRTDNDVKNFWSSRQKRLARILQASTSTSKSHRNKPKLHHHLPTFQAPKLSSSSEGESSSKPHHPCSFSCNDNSEVIKMVALPDLIKPKLPNSEQEESALFESNKSSSMMEQIPFPQIPDELQTDLTPFSLGDQDLLTRIDDPNFADYFGPLGAYELGLAPQHTIGFPFSDPSEGSCRIGSTDIIGSSKNYDSIFDDLPVNMFDHMDPPSIPSKL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0491 319 MobiDBLite consensus disorder prediction 128 171 - -
Ahy2g0491 319 Pfam Myb-like DNA-binding domain 23 73 - -
Ahy2g0491 319 ProSiteProfiles Myb-like domain profile. 76 119 IPR001005 -
Ahy2g0491 319 PANTHER TRANSCRIPTION FACTOR DUO1 13 317 - -
Ahy2g0491 319 SMART sant 19 69 IPR001005 -
Ahy2g0491 319 SMART sant 73 121 IPR001005 -
Ahy2g0491 319 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Ahy2g0491 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 71 IPR017930 -
Ahy2g0491 319 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Ahy2g0491 319 MobiDBLite consensus disorder prediction 150 171 - -
Ahy2g0491 319 CDD SANT 22 67 IPR001005 -
Ahy2g0491 319 CDD SANT 76 115 IPR001005 -
Ahy2g0491 319 Gene3D - 75 146 - -
Ahy2g0491 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 123 IPR017930 -
Ahy2g0491 319 Pfam Myb-like DNA-binding domain 76 115 IPR001005 -
Ahy2g0491 319 Gene3D - 20 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0491 Ahy-Chr2 6896505 6897892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0491 18 317 MYB Transcription Factor Family AT3G60460 49.196 3.24e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy2g0491 Myb_DNA-bind_6 5.60E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0491 K09422 - gmx:100805384 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0584 12 9392985 9393592 Ahy2g0491 2 6896505 6897892 hybridization