Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0488 ATGGTGAAGCATCAATCTCGTAGCACCTTGGTTCTAAGTCTCTGGTGGTTCTTTGGTGTGTTAGCAATAGTAGTGATGGGTCAAAGAAACAGTAGTGGTGCAACAACACTTCCAACAAGAGTAGTGAAAGTGGGAGCGGTGCTTGATGTTGGTGGAGCAATGGTTGGAAAGATGGGTTTGAACAGCATCAGAATGTGTATCCATGATTTCTATGTGTCTCATCCACATTACAAAACTAGGCTCCAACTCATTCTAAGGGACTCCCAAAGAGACATTGTTACTGCTGCTGGTCAAGCTGTGGATCTTATAAAGAATGAGCAAGTGGTAGCTGTGATAGGACCAATCACAACAATGGAAGCCATGTTTGTGATCAACCTCGGAGATAAAGCGCACGTGCCCATTCTGACGTTCTCAGAAATGAGCCCTTCTCTCTCATCACTCCACACCCCATACTTGTTCCAAATTGCACAGAAAGATTATTATTTAACTCAAGTCGAGGCTATAAGCGCCATTGTTCAAGCTTTTGGGTGGAAACAAGTGGTTCCAATATACGTGGACAACGGTTATGGCGAAGGACTAATTGCATCCCTAACCAATTCATTTCAGAAAGCATACATTCGTGTTCCTTATCTCAGCGCCATTGATTTCTCAGCCACAAATGATGCCATTGAGAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTTGTTCACATGACATCCCGTCTTGCCTCTCGTCTCTTCGCCATTGCCAAAGACATTGGAATGATGGATGAAGGTTATGTTTGGATTGTGACTGCTGGAATTGCTAATCTTTTTAACTCATTGGACTCTTCGGTTATGGAATCCATGGAAGGTGTGTTGGGTGTTAGGCCTTATATTCCAAGAACAAAACAGCTTCTTGATTTTAGAGCTCGATGGAAAAGAGAGTTCTTAAGAGACAATCCAACACTTGTTGATGTTAATTTGGATGTTTTTGGAATATGGGCCTATGATGCTACTGCTGCATTAGCCATGGCAGTTGAGAAGCTTGACAACACTGTTTTCGGCTTCACTAATGTCAGCAACGACTCCAGCAACGTGACTGATCTTGAAAACTTGGGCGTTTTGCGAAACGGCGAGAAGCTGAGGGAAGCTTTATCAAATGTTAGATTCAAAGGTGTTGGTGGTGAGTTCAAAGTAGTGGGTGGTGGGAAGTTAGAAGCATCACCATTTGAGATAGTTAATGTGATTGGTAATAGTGAAAGGAACATTGGATTTTGGACACCACAGAAGGGACTAATCAGAGACATGGATGCAAATAATTCAACTTCTAAGGAGAATCTAAGAACAATTCTATGGCCAGGGGACTCTTACTCTGTTCCAAAGGGATGGGAAATTCCCACAAATGGTAACAAGTTAAAGATAGGAGTCCCAGTGAAAGATAATGGCTTCTCTGAATTTGTGAAAGTAATCCATGATCCTATTACCAATTCTACAAAGGTCACCGGGTTCTGCATTGATGTGTTTAATGCTGTGGTAGAAGCGTTGCCTTATGCCCTTCCATTTGAATTCATTCCATTTGAAAATTCCAACAATGAGATGGCAGGAACATATGATGATTTGATCACCCAAGTTTATTATGAAAAGTTTGATGCTGTGGTGGGGGACACAACAATTACGGGAAACAGGTCCAAGTATGTCGATTTCACATTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAGTAAGAGACAATAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTAACAATATTTTTTACCTTTGTTTTCATAGGATTTGTTGTTTGGGTACTTGAACACCGAATCAATGAATGTTTTAGAGGGCCTACGCCTTATCAAATTGGCACTAGCTTGTGGTTTTCCTTCTCAACCATGGTATTTTCTCATCAAGAGAGAGTGGAGAGCAATTATGGAAGATTTGTGGTGATAGTATGGGTTTTTGTAGTTCAAATTCTGGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACAGTTGAACGACTACGCCCAGCATTTACAGATGTTCATCAACTCTTAAAGAATCGGTTGAATGTTGGTTATTTGGAAGGTTCTTTTGTTCATGAAATCTTGAAGGATTTGGGGTTCCATGATAACCAGCTTAAGATATATAAATCTGCAGAAGAATGCAATGATCTCTTCACAAAAGGAAGTGCTAATGGTGGTATCGATGCGGCTTTTGACGAAGTCCCTTACGTGATGCACCTTCTTGGAACTTATTGCTCCAAGTATGCCATGGTTGAGCCAAGATTTAAAACTGGTGGCTTTGGCTTTGTGTTTCCAAAAGGCTCACCTCTAGTGGGAGACATATCACGTGCAATCTTGGATGTGAGTGAAGGAGGCAAAATGAGAAGAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTCAAGATTCAAATAACAATGCAGCACAAGTATCTTCTTCTACAAGCCTAGGACTAGAAAGCTTCTGGGGTCTGTTCTTGGTTGTAGGTATTTGTTGCTTATTAGCCCTCGTTATCTTTTTAGCCACATTCATATATCAGCATAGACATATTTTGTTAAGCCATAATCTCCCTGATGATAGTAGTTCTATAAGAACACGCATTGGAAAGTTGCTAAATACCTTCCATGAGAGAGATCTAAGCTCCCACACTTTCAAGAAAAGTGATTCAGGCGTAACAACAAGTGTGTCTTCTTGCCCTCCAATTAGTCCATCTAGTTACACAGGCTCAGGCTTTTCGGCCACTCCAAATACTCAACACAAACCTACACAAGAACCTCCTGTCATTACAACAAAAGGGATACAACCTCTTATTAAGCCACATAGATCCCTCTAG 2901 0.4133 MVKHQSRSTLVLSLWWFFGVLAIVVMGQRNSSGATTLPTRVVKVGAVLDVGGAMVGKMGLNSIRMCIHDFYVSHPHYKTRLQLILRDSQRDIVTAAGQAVDLIKNEQVVAVIGPITTMEAMFVINLGDKAHVPILTFSEMSPSLSSLHTPYLFQIAQKDYYLTQVEAISAIVQAFGWKQVVPIYVDNGYGEGLIASLTNSFQKAYIRVPYLSAIDFSATNDAIERELYKLMTMQTRVFVVHMTSRLASRLFAIAKDIGMMDEGYVWIVTAGIANLFNSLDSSVMESMEGVLGVRPYIPRTKQLLDFRARWKREFLRDNPTLVDVNLDVFGIWAYDATAALAMAVEKLDNTVFGFTNVSNDSSNVTDLENLGVLRNGEKLREALSNVRFKGVGGEFKVVGGGKLEASPFEIVNVIGNSERNIGFWTPQKGLIRDMDANNSTSKENLRTILWPGDSYSVPKGWEIPTNGNKLKIGVPVKDNGFSEFVKVIHDPITNSTKVTGFCIDVFNAVVEALPYALPFEFIPFENSNNEMAGTYDDLITQVYYEKFDAVVGDTTITGNRSKYVDFTLPYTESGVTMVVPVRDNRKKNAWAFLKPLTWDLWVTIFFTFVFIGFVVWVLEHRINECFRGPTPYQIGTSLWFSFSTMVFSHQERVESNYGRFVVIVWVFVVQILVQSYTASLTSLLTVERLRPAFTDVHQLLKNRLNVGYLEGSFVHEILKDLGFHDNQLKIYKSAEECNDLFTKGSANGGIDAAFDEVPYVMHLLGTYCSKYAMVEPRFKTGGFGFVFPKGSPLVGDISRAILDVSEGGKMRRIENAWLNGSSCQDSNNNAAQVSSSTSLGLESFWGLFLVVGICCLLALVIFLATFIYQHRHILLSHNLPDDSSSIRTRIGKLLNTFHERDLSSHTFKKSDSGVTTSVSSCPPISPSSYTGSGFSATPNTQHKPTQEPPVITTKGIQPLIKPHRSL* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0488 966 CDD PBP1_GABAb_receptor_plant 43 430 IPR044440 -
Ahy2g0488 966 Gene3D - 723 825 - -
Ahy2g0488 966 Gene3D - 162 325 - -
Ahy2g0488 966 SUPERFAMILY Periplasmic binding protein-like II 447 820 - -
Ahy2g0488 966 Pfam Receptor family ligand binding region 63 415 IPR001828 -
Ahy2g0488 966 MobiDBLite consensus disorder prediction 929 952 - -
Ahy2g0488 966 CDD GluR_Plant 468 818 - -
Ahy2g0488 966 Gene3D - 377 469 - -
Ahy2g0488 966 SUPERFAMILY Periplasmic binding protein-like I 40 462 IPR028082 -
Ahy2g0488 966 MobiDBLite consensus disorder prediction 929 966 - -
Ahy2g0488 966 Pfam Bacterial extracellular solute-binding proteins, family 3 495 819 IPR001638 -
Ahy2g0488 966 Gene3D - 470 588 - -
Ahy2g0488 966 SMART GluR_14 469 820 IPR001320 GO:0015276|GO:0016020
Ahy2g0488 966 Pfam Ligand-gated ion channel 820 854 IPR001320 GO:0015276|GO:0016020
Ahy2g0488 966 PANTHER GLUTAMATE RECEPTOR 2.9 42 923 - -
Ahy2g0488 966 PIRSF IGluLR_plant 7 949 IPR017103 -
Ahy2g0488 966 Gene3D - 589 722 - -
Ahy2g0488 966 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0488 Ahy-Chr2 6869394 6874504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0488 42 946 Ion Channels AT2G29110 50.216 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0488 K05387 - pvy:116134990 1013.45