Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0479 ATGAATACAATGATGCAAGGGGAAGGAGAAGTGGAAAACATTCCGCACTGTACGATGTTGTTCCTTCACCGCCGTCTATGCACCACCGCCACCAGAACACTGGTCCCAAACCTCTCAAAGGTTCCTTCAAAGTACAAGAACCTTGCTCTCTCTCAAGCCCAGAAGATCCTCACTGATTACCTTCATTCCACAAGGTCCATCCCTTATGCCTTTGCTGATCAGATTGCTGCTAATTCTCACACTTCTCTCTCCAACCTCATTGCAAAGGTGCGATTTTCAGCTCCGTCTTTCTCCCACACCCTCAACAAGTTCCTCAGTGTTCAGGTCATTGGGATATGTTTGGCTTTCCCTTTTGTTTTTGGTGAGCAGGGAGGAGTGTTGGAAGCTGAGATTGATGGGCTACTTGCTGATCTCAAGTTGGTTTTTCTGGATTTTGATTTGGCAGGGTGTGTTGAGGGGAATGCAGATTCTTGGTATGAGGTATGTAGGAAAATTCGGGTTTTTTACAATTCGAATGGTGAGAAGGGTAAGATGGGGGAACTCATTGGAAGGTATAAGAATGTGATTCTTGAGCATGGAGAAGAGGAGTTGATGCAGAACGCTGAGTATTTTTCTAGGTTTGGTGTCAAGAAGGAGGAAGTAGCTCGATTGATCCTACATGACTCGGAATTGTTGAATTTTGATTTCGAAACGCCGGTGATCAATGTATTGAAGCTGTTGAAACACTTTGGCATGAGCTCCAAGGATCTTGAGGATGTCCAGCAAAACTATGCTCATGCATTGGGAACAATAAAAATGGTTAATTTGCCTAATGTAATGAGGGCTTTGGGTTTAAGTAAGTGGTTCTTTAATAGGATAAAGGATGGGAAGCATCAACTCTTACTGACTTATGTCACAAGCTTTCCCAATGAAGACCAAGATAAAGGATATCAAGATGGTTTAAAGGCGATTCGTGCTTCGAGAACCCGAGTTCACACCATGAATAAACTGAATTTCTTGCATGCCTTAGGCTTTGGAGAAACTGCTTTGACCATGGCTGTCCTAACTTACTTGAATGGGACTAGCAGCGAGTTACAGGAACGATTCGATTGCCTTCTTCATTTAGGGATTGAATTCTCAAAGCTCTCCAAGATAGTTGCAATTCGACCTAAGGTTCTAAGCCAACACCCGAAAATCATTGAGAAAAAGATTAAGTTCCTCTATGAGGAAATGGGATCCTCTGTGGAGCTTTTGGACACTTTTCCAGCATTCTTATGTTTTGACTTGGAAAAGCGCATTAAACCTAGGTTCAGATTCTATATGTGGATGATAGAAAAGGGTTATTGTGCCAAAAACTTTTCTATGGCAACCATGATTGCGACCAGCGACAAGAACTTTGTTCCTCATGCTTTTCGTATCCACCCAGCTGCTCCGAAACATTGGTTTGAGCAATTCTATCTCCGCAAATTGCCGGAATGA 1458 0.4287 MNTMMQGEGEVENIPHCTMLFLHRRLCTTATRTLVPNLSKVPSKYKNLALSQAQKILTDYLHSTRSIPYAFADQIAANSHTSLSNLIAKVRFSAPSFSHTLNKFLSVQVIGICLAFPFVFGEQGGVLEAEIDGLLADLKLVFLDFDLAGCVEGNADSWYEVCRKIRVFYNSNGEKGKMGELIGRYKNVILEHGEEELMQNAEYFSRFGVKKEEVARLILHDSELLNFDFETPVINVLKLLKHFGMSSKDLEDVQQNYAHALGTIKMVNLPNVMRALGLSKWFFNRIKDGKHQLLLTYVTSFPNEDQDKGYQDGLKAIRASRTRVHTMNKLNFLHALGFGETALTMAVLTYLNGTSSELQERFDCLLHLGIEFSKLSKIVAIRPKVLSQHPKIIEKKIKFLYEEMGSSVELLDTFPAFLCFDLEKRIKPRFRFYMWMIEKGYCAKNFSMATMIATSDKNFVPHAFRIHPAAPKHWFEQFYLRKLPE* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0479 485 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 33 106 - -
Ahy2g0479 485 Gene3D Transcription termination factor 3, mitochondrial 283 478 IPR038538 -
Ahy2g0479 485 Gene3D Transcription termination factor 3, mitochondrial 154 282 IPR038538 -
Ahy2g0479 485 PANTHER CGI-12 PROTEIN-RELATED 33 106 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 PANTHER CGI-12 PROTEIN-RELATED 103 478 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 103 478 - -
Ahy2g0479 485 Pfam mTERF 345 459 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 Pfam mTERF 163 262 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 SMART mt_12 408 440 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 SMART mt_12 376 407 IPR003690 GO:0003690|GO:0006355
Ahy2g0479 485 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0479 Ahy-Chr2 6734896 6737408 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy2g0479 mTERF 4.50E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0479 - - adu:107473184 965.681