Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0459 ATGGAGGGAAGTTCTGCTTCTTCTTCTTCTTCTTCTCAATTCTCAAAGTCTTTTTCTGATGTAGATGATTCACTACTCTTAGTTGATGATTTCTACTTCTCAGCTCTCTTTGATTCTGAAGAATTATTCCCAATCAATGATGAAAAATATGCAGAGGAACTACATTTACAAGAAGCTCTGTATTCTTCAGTTATAAGCCTCAAGAGAAAACTCAAAGAGGTTCATTCTGAATCTTCTACTCATCAAACTCATCATCATCGTCCTAGTTATCTTCATGATCATCAAGTATTCTTGTGTGCTATTTGCATGGATTCAAAACCATCCCAAGAGATTTTCATCAACCAAAACTGCAACCACTCATTCTGTGATGAATGCATTGCAAAATATGTAGCTGCAAAGATTCAAGAGAATATATCAAATGTGAAGTGTCCTGAACCAAAATGCAAAGGAATATTGGAGCCGCAGAATTGCATGTCAATAATTCCAAAGGAAGTGTTTGAAAGATGGGAGAATGCACTTTGTGAGAATCTTGTTCTTGCAACATCAAAGAAATTCTATTGCCCTTTCAAGGATTGTTCAGCAATGTTGGTGAATGATGATGGGAATGAAGTTGTGACTTGTTCTGAGTGTCCACATTGTCATAGATTGTTCTGTGCACAGTGTAAAGTTGCATGGCATGCTGGAATGGAATGTGGGGAGTTTATGAGTTTGAATGAAAATGAAAGAGAGAAGGAAGATCTTATGGTGATGAATCTTGCAAAGGCCAAGAGTTGGAGAAGGTGTTCTAAATGCAGAATGTATGTTGAAAAAAATCAGGGATGTTCACACATTTCTTGCAGGTGTGGCCATCATTTCTGTTATGCTTGTGGAAAGCCATGGAATCAGTACCATGGTTGTACATAA 903 0.3732 MEGSSASSSSSSQFSKSFSDVDDSLLLVDDFYFSALFDSEELFPINDEKYAEELHLQEALYSSVISLKRKLKEVHSESSTHQTHHHRPSYLHDHQVFLCAICMDSKPSQEIFINQNCNHSFCDECIAKYVAAKIQENISNVKCPEPKCKGILEPQNCMSIIPKEVFERWENALCENLVLATSKKFYCPFKDCSAMLVNDDGNEVVTCSECPHCHRLFCAQCKVAWHAGMECGEFMSLNENEREKEDLMVMNLAKAKSWRRCSKCRMYVEKNQGCSHISCRCGHHFCYACGKPWNQYHGCT* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0459 300 SMART ring_2 99 148 IPR001841 -
Ahy2g0459 300 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 28 299 IPR031127 GO:0004842|GO:0016567
Ahy2g0459 300 SUPERFAMILY RING/U-box 167 234 - -
Ahy2g0459 300 SMART ibrneu5 167 231 IPR002867 -
Ahy2g0459 300 SMART ibrneu5 241 299 IPR002867 -
Ahy2g0459 300 Gene3D - 185 233 - -
Ahy2g0459 300 SUPERFAMILY RING/U-box 242 299 - -
Ahy2g0459 300 ProSitePatterns Zinc finger RING-type signature. 117 126 IPR017907 -
Ahy2g0459 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 181 IPR013083 -
Ahy2g0459 300 Gene3D - 234 300 - -
Ahy2g0459 300 ProSiteProfiles TRIAD supradomain profile. 95 300 IPR044066 -
Ahy2g0459 300 Pfam IBR domain, a half RING-finger domain 167 231 IPR002867 -
Ahy2g0459 300 Pfam IBR domain, a half RING-finger domain 252 299 IPR002867 -
Ahy2g0459 300 SUPERFAMILY RING/U-box 93 176 - -
Ahy2g0459 300 ProSiteProfiles Zinc finger RING-type profile. 99 147 IPR001841 -
Ahy2g0459 300 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 28 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0459 Ahy-Chr2 6412196 6414304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0459 99 298 C3H Transcription Factor Family AT2G31770 28.502 1.05e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0459 K11975 - jre:109004923 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0528 12 8565389 8566515 Ahy2g0459 2 6412196 6414304 hybridization