Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0458 ATGGATGAGGCGGCGTTTGGAATAGAATATTTAGATGGTGATGGTGACCTGGGCAATAATGTACGTGACAGTGGTTTAACAAGGCCGGAGGAGGTGATGGAGATGTTGTTTAACTCTCCTGATGAGGCTGCTCGTTTCTACGAACAGTATAGCCGAGGCAAGGGTTTTGCTATGCGTGTTGGTAAGAAGTTAAGAAATAAGAATGGGGACATCGTGCGATACACATATTTGTGCAACAGAGAAGGGTTTAGGCAAAAGAAGTGGGTGGAGTTGGAAGGAAGAAAGAGAGAGCACAAGGTGGTTACGCGATGTGGGTGCATGGCAGAGATGCATATCAAGCAAAATGGTCAGATGGGTAAATGGTATGTGTCAAGATTTGTAGATGACCACAATCACGAGCTCCTCCCTCCGAAGTTGGTGGAATACTTGCCTCCACATAGGAAGATGTCGGATGTGGACGTAGCCCACATGGATAGCTTACGGCAAGTTGGGATTTCGGTTCCTAAAATATATGAGTCGCTTGCAGCACAGGCTGGTGGCTTTGATCATATCCCATTCACAAAGAGAGATATGTACAACGAAGTGAGGCGCCAACGAGGCATGAGGAAGGGAGATGTCAATGCAACGATAAGGTACTTTGAGGCAGGTGCGAAGGCGGATGAGAAACTCTTTTGGAGGTGTCAGGTGAGTGCAGATCAGCATATGTGTGACCTGTTTTGGTGTGACGGGAGGAGTCAGGATGATTATAAAATTTTTGGTGATGTCCTTGCGTTTGATGCAACGTACGGGCGCAACAAATACAATCTACCGGTCATTATTTTCTCTGGGGTGAACCATCACAACCAGACGTGCGTCTTTGGGGCTGCCATGGTCTCTTGTGAAACCCAAGCAACTTATGTTTGGGTGTTGCAAAAGTTGTTGGAATGCATGGAGGGGAAGGCACCCAAGGCAGTAATAACAGACGGAGATCGTTCTATGCGAATGGCAATTAATGAAGTTTTTCCGGAAGCTCACCACAGGCTTTGTGCATGGCATCTACTAAAAAATGCCACAACAAATGTGTGCTTACCGCGGTTTACAACGTTATTTAGATATTGTATGCTTGCTGATATTGAGATAGAAGAGTTTGAACAGCATTGGGAGGCAATGTTGGATGAGTGTGGAGTTCGAGATGTAGAGTGGGTTCAGGATACATACAGGAATAAATTATATTGGGCAACTGCATACATACGTGGTAGGTTCTTTGCCGGCATTAGGACGACATCGCGATGTGAATCGCTGCATGCAAAGCTAGGCAGGTTTGTGGAGAGGAGGTATGGGATACTCAACTTTGTGACGAACTTCCAGCGTTGTGTTGAGTTCCTCAGAGATAACGAGGATGAGATGGACTTTCGGTCCTCGTATGGGACCCCCGTACTGCAGACTCAGTTTCCGGAACTTGAGAAATCCGGAGCAATGAAGTATACCCGAGAGATATTTTCAAGGTTCCGTGAATCCTTGAAAAGGTGTGTTCGGATAACCGTTGTGGAAAGCCAGCCGTGTGAGGGCAGTACTATTTATGTGACCCAGAAGTATATGCGACCGGGAAGAAAGTGGAATGTTATGCATGTGTTGGCGTCGGATAAATATACATGCAGTTGCCAAAGAATGGAATCGTTTGGGCTACCTTGTGTGCATATACTCTCAGTTTTGGTTCGGTTAGACGTGGGTTCTCTTCCAGACACCTTGGTCTTAGAGAGGTGGACTAAGTCAGCCAAGTTCGGTTTGTATGATGATATTGCTGGGGATAAAATGGTCGATATTGCTGCCCTGTACAGGATGCGGATGGAAACATTTTTGCAGCACTGCAAGCGTTTGGCTCGGCTTATTTGTAACAACGACGACTTATTCAAGTTGTATACAGAGCAGATAGTTCAGGAAGCAACTAATCTTGAAAGTATGAATGATTCGGGGAATAGTGTCGGCGTTGGTGGTGGCGGCAACAATGGTAGAGTACTAGATCCGATTGGGGTTCGTACCAAGGGCACCGGGCGTGGTAATGTACAGGTTGGGGCAAGGGGAGTGAAGCGTAGAAAGTGTAGCACGTGTGGGGTAGTCGGACATCGTCGAACTCAATGCCCAAATCGGGCGAACATGTCGGTGCCAAACAGCCAGTATGAGGTGCCGCAAATGGTGTCACAGTCTGCGGCGCGTGCTGAATTTCCTCCTGTCAAGAATATAGGGGTGCAGGATTGCTATCGTCCATCAGCGGCGGACACTTCAGATTTTCGAGCAGCTGTAGGTGGGTGTTCCCCAAAGTAA 2301 0.472 MDEAAFGIEYLDGDGDLGNNVRDSGLTRPEEVMEMLFNSPDEAARFYEQYSRGKGFAMRVGKKLRNKNGDIVRYTYLCNREGFRQKKWVELEGRKREHKVVTRCGCMAEMHIKQNGQMGKWYVSRFVDDHNHELLPPKLVEYLPPHRKMSDVDVAHMDSLRQVGISVPKIYESLAAQAGGFDHIPFTKRDMYNEVRRQRGMRKGDVNATIRYFEAGAKADEKLFWRCQVSADQHMCDLFWCDGRSQDDYKIFGDVLAFDATYGRNKYNLPVIIFSGVNHHNQTCVFGAAMVSCETQATYVWVLQKLLECMEGKAPKAVITDGDRSMRMAINEVFPEAHHRLCAWHLLKNATTNVCLPRFTTLFRYCMLADIEIEEFEQHWEAMLDECGVRDVEWVQDTYRNKLYWATAYIRGRFFAGIRTTSRCESLHAKLGRFVERRYGILNFVTNFQRCVEFLRDNEDEMDFRSSYGTPVLQTQFPELEKSGAMKYTREIFSRFRESLKRCVRITVVESQPCEGSTIYVTQKYMRPGRKWNVMHVLASDKYTCSCQRMESFGLPCVHILSVLVRLDVGSLPDTLVLERWTKSAKFGLYDDIAGDKMVDIAALYRMRMETFLQHCKRLARLICNNDDLFKLYTEQIVQEATNLESMNDSGNSVGVGGGGNNGRVLDPIGVRTKGTGRGNVQVGARGVKRRKCSTCGVVGHRRTQCPNRANMSVPNSQYEVPQMVSQSAARAEFPPVKNIGVQDCYRPSAADTSDFRAAVGGCSPK* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0458 766 SMART 26again6 543 570 IPR006564 GO:0008270
Ahy2g0458 766 ProSiteProfiles Zinc finger SWIM-type profile. 535 568 IPR007527 GO:0008270
Ahy2g0458 766 Pfam MULE transposase domain 255 349 IPR018289 -
Ahy2g0458 766 PANTHER OS02G0262500 PROTEIN 30 609 - -
Ahy2g0458 766 Pfam SWIM zinc finger 542 564 IPR007527 GO:0008270
Ahy2g0458 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 609 IPR031052 GO:0006355
Ahy2g0458 766 SUPERFAMILY Retrovirus zinc finger-like domains 682 712 IPR036875 GO:0003676|GO:0008270
Ahy2g0458 766 Pfam FAR1 DNA-binding domain 45 136 IPR004330 -
Ahy2g0458 766 ProSiteProfiles Zinc finger CCHC-type profile. 691 708 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0458 Ahy-Chr2 6395465 6400704 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy2g0458 MULE 1.10E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0458 - - adu:110274804 1044.65