Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0409 ATGGCTAGAAGTGCCACAATTCCATTTCCAATACTTGATTTCATTCCTGTTGGATTCAGATTCAAGCCAACAGATGAAGAGCTTGTGAGCTATTACCTCAATCACAAGCTCCTAAATGACAATTTTCCAATCAATATTATCCCTGACATTGATCTTTGCAAGGTTGAACCTTGGCAAATTCCAGCATTATCAAAGATAAAATCGGATGATCCAGAATGGTTCTTCTTTAGTGGACGTGATTACAAGTATGGAAAGAGCAAAAGATCAAACAGGGCAACCAAAGGAGGATATTGGAAAGCCACAGGACAAGATAGATACATAAAGGAAAGAGGAACTACCAATGTAATTGGGAGCAAGAAGACACTGGTTTTCTATAGTGGCCGTGTTCCTAATGGTGTCAAAACCAATTGGGTTATCCATGAGTATCATGCTACTACCTTTGATGATAGCCAGAGGAATTTTGTTTTGTGTCGCTTGATGAAGAAAGCCGAGAGAAAATCCGAAGATGGAACTGATGCACAAGCTTGTGATGAGGGGGAACCTAGCACTCATATGGAAGAAGCAGATGAGAGTGTCCCAAGTATGTTTGAGTCGCCAGATGTGGACATGGGTTCGATCTTCCACACACTGCCTCAAGACGGATCATCATCACAGCACTCTCCAGTCAGCATTGAACAGCAAGAATCCTTCCCATTCTCCCCATCTGAAAATTATTACCTTGTAAATGAAGATAGAAGTATGCATATACAATTCGAAACAAACGAAGAGAAGCAAGATGCTGAGAAATTTGCGGATTCGATTTTGGATGGTGGAAGTATAGCTATGTTTGAAGAAAGACAGCAGCATCATACTTTCATGAATAATCACCTCCGCTCGGTCCCATCAATGAGGGTATGCTATGAAAGCAGTGACACAGATGCTGAAGTAGTCTCTAGACGGGCTGGTTCAAGAGAATACCATGTATCAAAAATGGTTCAATCATCACATAGTGCTGCGTGCACAGATAAAACTAGAAGTATCTCTTCAGAAGACTTTTGGGGAGTGGATTCATCTTCATGTGACTCAAATGCAGATAAACCTTTTGAGATCAGTTCTATTGAAATTTCTAGTCCTCCATCGGCTCTAAGTAGATCGAAAAATCAATATAATCCGAGGCTATCTCAAACACATAGGAAGGTTTCAAGCAATGCAATTCCCCATCTTGAGGATAAGAAGAAATTGACCACTGTGGAACAATCAAGAAGAGATCAAGAAAAAGCTCAAAAAACTAGTCCAGGAAAGAAGCTAGAAACCAGAAGCTCTGATGTTAATAGAATTGGTAGTTTCATCCACCTAGAGCCGTGTTCGTCGAGCGAAAGCCTGACTCCACGAGCGGTATACCTTGTTAATGTAGTTATTGGGATTTTGTTGCTTCTAGCCATTAGTTGGGATGTGCTATCTTGTTAG 1446 0.408 MARSATIPFPILDFIPVGFRFKPTDEELVSYYLNHKLLNDNFPINIIPDIDLCKVEPWQIPALSKIKSDDPEWFFFSGRDYKYGKSKRSNRATKGGYWKATGQDRYIKERGTTNVIGSKKTLVFYSGRVPNGVKTNWVIHEYHATTFDDSQRNFVLCRLMKKAERKSEDGTDAQACDEGEPSTHMEEADESVPSMFESPDVDMGSIFHTLPQDGSSSQHSPVSIEQQESFPFSPSENYYLVNEDRSMHIQFETNEEKQDAEKFADSILDGGSIAMFEERQQHHTFMNNHLRSVPSMRVCYESSDTDAEVVSRRAGSREYHVSKMVQSSHSAACTDKTRSISSEDFWGVDSSSCDSNADKPFEISSIEISSPPSALSRSKNQYNPRLSQTHRKVSSNAIPHLEDKKKLTTVEQSRRDQEKAQKTSPGKKLETRSSDVNRIGSFIHLEPCSSSESLTPRAVYLVNVVIGILLLLAISWDVLSC* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0409 481 ProSiteProfiles NAC domain profile. 15 162 IPR003441 GO:0003677|GO:0006355
Ahy2g0409 481 MobiDBLite consensus disorder prediction 167 186 - -
Ahy2g0409 481 MobiDBLite consensus disorder prediction 368 432 - -
Ahy2g0409 481 MobiDBLite consensus disorder prediction 368 395 - -
Ahy2g0409 481 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Ahy2g0409 481 Gene3D NAC domain 24 167 IPR036093 GO:0003677|GO:0006355
Ahy2g0409 481 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 13 433 - -
Ahy2g0409 481 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 433 - -
Ahy2g0409 481 SUPERFAMILY NAC domain 14 162 IPR036093 GO:0003677|GO:0006355
Ahy2g0409 481 MobiDBLite consensus disorder prediction 396 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0409 Ahy-Chr2 5664331 5668142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0409 12 162 NAC Transcription Factor Family AT4G35580 57.051 5.21e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy2g0409 NAM 7.80E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0409 - - adu:107473112 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0456 12 7117558 7121435 Ahy2g0409 2 5664331 5668142 hybridization