Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0408 ATGAAAAACAAGCGGTGTAACAGAAAAACCAACATGGGATATTGGAAGATCACAGGAAAAGAGAGAATCATCAAAAGAAGAGGGACAGACAGTGTCATAGGTACAAAAAGAACACTAGTTTTCTACGAGCCTCCACATAATGTCAAAACCAATTGGGTTCTTCATGAATATCATGCATTTGATCAAAAGAGCAACATCGTATTGAGCCGTGTAATAATGAATGCTGAGAAAAGGGAACAGAAGCTAAAGACAAAAGCAAGCAACATAGTCGAAGAGGAGGAAGTAAAATGTGAAGATGAACCATGCAGCGAAATTACTGGCTGTGTTACCCAAGCAACTACAGAAGATGCAATCATTCCTGATAATGCATGTGTTTCATCCGAGCGGCAACAACCTCAAGTTATAGATTATGAAATTCTCTCATCGGGAGAACAATCTTCAGTAGCCCATTCCGATAATGAAAACAATAATGCCGCGGAAGCAACATGGAGGCAAGATGCCGATATGAATATCGAGTATTTTTGGAATTTGCTGTTTTCTAGCATCGATGCTGACCCTCATGCTGAGTTCTTAAATTCGGTGTTGGCAGGGGATGATCAACTCTATGTTGATTCCGGCCACCATTGA 627 0.4051 MKNKRCNRKTNMGYWKITGKERIIKRRGTDSVIGTKRTLVFYEPPHNVKTNWVLHEYHAFDQKSNIVLSRVIMNAEKREQKLKTKASNIVEEEEVKCEDEPCSEITGCVTQATTEDAIIPDNACVSSERQQPQVIDYEILSSGEQSSVAHSDNENNNAAEATWRQDADMNIEYFWNLLFSSIDADPHAEFLNSVLAGDDQLYVDSGHH* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0408 208 Gene3D NAC domain 1 80 IPR036093 GO:0003677|GO:0006355
Ahy2g0408 208 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 3 145 - -
Ahy2g0408 208 Coils Coil 72 92 - -
Ahy2g0408 208 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 145 - -
Ahy2g0408 208 SUPERFAMILY NAC domain 3 72 IPR036093 GO:0003677|GO:0006355
Ahy2g0408 208 Pfam No apical meristem (NAM) protein 3 58 IPR003441 GO:0003677|GO:0006355
Ahy2g0408 208 ProSiteProfiles NAC domain profile. 1 74 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0408 Ahy-Chr2 5600059 5605335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0408 5 73 NAC Transcription Factor Family AT2G33480 45.570 4.28e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy2g0408 NAM 6.60E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0408 - - ahf:112734711 422.935