Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0407 ATGGAGTTGATGCAAGAATCCAACAAAGGCTACTCTCAAGATTTGGAAGAAGAAGAGGAGGAGGAAGAAGCACCGGGAGAAGAAACCACCACCGCCGCCGGGTTACACCATCATCAACATCAAGATGCAACAACATCAAATTACTTCAACCACACAACAAGAATGAATCAAAATCAACCGCAACCGCAACCGCAACAGTTAGTAGACTTTATGGACTTGTCACTTGGGACAAACATCAACCACCATGAAGGCATCAACAATTTCCAAGGATACTCCTCTTCCTCCGCCGCCGCCACCACCACCACCACAAATAATACAAATCTACAACCTCCGCTGCCTGCTCCGGCGGAGAAAGAGCACATGTTCGACAAAGTAGTGACGCCGAGCGACGTAGGGAAGCTGAACAGGCTGGTAATTCCCAAACAGCATGCGGAGAAGTACTTCCCGCTCGACTCGACGTCGAACGAGAAGGGACTTCTCCTGAATTTCGAAGACCGGAACGGGAAATTGTGGCGGTTCAGATACTCTTACTGGAACAGTAGCCAGAGCTATGTGATGACGAAAGGATGGAGCAGATTTGTGAAGGAGAAGAAACTTGATGCAGGTGACATTGTTTCTTTCCAACGCGGAGTTGGAGAAAATTATAGACATAGATTATACATAGATTGGAGAAGAAGACCTGATAATCATCACCATCACCATCACAATCTCCATGGAGGACTTGATTTTCCCTCTTCGTCTTCCAATTTCATCACGCCCTTCTTCATTCCCAGTCAAGCGTCTTCACATTACTCTACGATTCGATACGGTGGCAGATTTTCCTCTCTGCCACCGCAATCGCAACCACAGCCACAGCCACAGCCACAACCGCAAATGATGATGTCACCAAGACATCATCATTATTATCCAATTCATCATGGTGGATATGGCGGCTATAATCATCCTCACAGTAATGAGTTGTTTTATCTGAGATCAACAACATCAACAACACTACCTTCTCCTCCTCCTCCTCCTTCTTCTTCTTCAATGTCAATGGTTGATCATCATCATTACCATCAAGGATTATTGGCAAGACAACAACAAGAACAAGAACAAGAAAGGGGGTCACCAATGATCATAGATTCAGTACCAATTGCTCATCATTTTCATCATCATGGGGGTGGTGGTGGTAATGGTAATAATGGTAGTAATAGTAATAGTAACAATAATAGTAACAATAATAATTCTGCAGGAAAAAGGTTAAGGCTATTTGGTGTGAACATGGAATGTGCTTCTTCTTCTTCAACAACAACACAAGAAGATCATCAAGAACAAGAACAAGAAGATCCAAAATGCTTCACCTTGTTCTCTTCTACTAACTCAAGGGATGCAGAAGAATCTGGTGGAGAAGATCAGAGAAGAAGAATAAGGGAGCAAGCTGCAAATTTTTTTGATTTGGACCCTTCTTTGCAATTCCGCCAACACTGA 1467 0.4369 MELMQESNKGYSQDLEEEEEEEEAPGEETTTAAGLHHHQHQDATTSNYFNHTTRMNQNQPQPQPQQLVDFMDLSLGTNINHHEGINNFQGYSSSSAAATTTTTNNTNLQPPLPAPAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGENYRHRLYIDWRRRPDNHHHHHHNLHGGLDFPSSSSNFITPFFIPSQASSHYSTIRYGGRFSSLPPQSQPQPQPQPQPQMMMSPRHHHYYPIHHGGYGGYNHPHSNELFYLRSTTSTTLPSPPPPPSSSSMSMVDHHHYHQGLLARQQQEQEQERGSPMIIDSVPIAHHFHHHGGGGGNGNNGSNSNSNNNSNNNNSAGKRLRLFGVNMECASSSSTTTQEDHQEQEQEDPKCFTLFSSTNSRDAEESGGEDQRRRIREQAANFFDLDPSLQFRQH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0407 488 MobiDBLite consensus disorder prediction 424 488 - -
Ahy2g0407 488 MobiDBLite consensus disorder prediction 390 411 - -
Ahy2g0407 488 Coils Coil 1 21 - -
Ahy2g0407 488 MobiDBLite consensus disorder prediction 13 27 - -
Ahy2g0407 488 MobiDBLite consensus disorder prediction 1 42 - -
Ahy2g0407 488 MobiDBLite consensus disorder prediction 268 298 - -
Ahy2g0407 488 CDD B3_DNA 120 221 IPR003340 GO:0003677
Ahy2g0407 488 MobiDBLite consensus disorder prediction 380 411 - -
Ahy2g0407 488 MobiDBLite consensus disorder prediction 326 346 - -
Ahy2g0407 488 SMART B3_2 122 227 IPR003340 GO:0003677
Ahy2g0407 488 Gene3D - 116 237 IPR015300 -
Ahy2g0407 488 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 85 454 - -
Ahy2g0407 488 ProSiteProfiles B3 DNA-binding domain profile. 122 225 IPR003340 GO:0003677
Ahy2g0407 488 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 85 454 IPR044800 GO:0003700
Ahy2g0407 488 MobiDBLite consensus disorder prediction 457 474 - -
Ahy2g0407 488 SUPERFAMILY DNA-binding pseudobarrel domain 118 227 IPR015300 -
Ahy2g0407 488 Pfam B3 DNA binding domain 122 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0407 Ahy-Chr2 5552552 5555128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0407 116 429 RAV Transcription Factor Family AT2G46870 44.828 2.64e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy2g0407 B3 2.00E-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0407 - - gsj:114390989 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0453 12 6996336 6998979 Ahy2g0407 2 5552552 5555128 hybridization