Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0402 ATGATGCATATTATTATTGGTTTAGAACTTCTTGTGTTCTTACCTTTTTCTTGTTCTCTTCAACCACCTAATTTGCTTCCAAATCCTTGCAATGAAACTTGTGGAAAACTCCATGTTCCTTTCCCATTCTTTGTCAACTCTTCTTGTGCCTCAATCTCAACTTCTTTCAACCTTTCTTGTTCAAACTCCTCTAACCTTTTCCTCAAAATTGATTCACAAAGTTACAAGGTTTTAGAGTTCTTCAATGATGGCTTGTTGGTGGACTTTCCAGCAGGCGCATCGTCGTCTTCGACTTGCCGAATGTACAATGACTTGAACTCATTTGGGAAAAGTTTTGAAGGAAAAGATGAAGATCAGTATGGAATCTCATTGGACAATGTTGTTGGACTCTATGACTGTGATGACTCCTCAGTATGCAAACCAGATTGTGAAACAATTGAGCTTCCAGGGTGTGATGGAAGTGGCAACAACCTTGGATGCTGTTATCCACTGAGTGATCATAGCATATGGCACAGTGGTGAAGGGTTCTCAGTGTTCTCTGAATTTGGATGCAGAGGGTTCTCAAGTTGGGCTGTTCTTAGAGGATCTAATTCAGGAAAACATGGGGTGAAGTTGGAATGGGGTGTTCCTTTGAAGAAGAATTCATCATCAATGGAGAAAGTTTGTGATTTGAATGCAGAAATGGTGAATGCTACTTCAGTTCAAGGTGCAGTTAGGTGTGTTTGTCAAGATGGATTTCTTGGTGATGGTTTTCTTAATGGATCAGGATGCTTGCAATCTTGTATAAAGAATGGACAGGAAGCATATGGAGACAACTGTTACATCAAAAAACATGATCAAAGGGAAATGCTCATCATTGTAGGAATCTTGGGTCCATTTCTCATTGTTGCTTCATTGATTGCACTATTTTATCTTCTCAAAAAACCAGCAACAAAGCCAGGAATGTTTGACACAGAGCATGCCTATTACCACAGCATTTCGTTCCGAAAACCGAATCGAACTCGTCTATTCAGCCACCATGATCTAGACAAAGCCACCAAAGGTTTTGAAGAAGGACAGAAGCTTATGAGTGGACTAGCCGGGTCGATTTTTGCCGGAGTTCTCGGCGACGGATCCCACATAGCAGTTCAGAAGCTAAAATGTGAGAATGAGAAGGACATAATCCAACTTGTATCACAAATTGAGATTCTATCAAACATTGTGCATAGGAACATGGCTTGTGTTCTTGGATGTTGCATTGAATCTAGTTACACTCCTCTAGTGGTTTATGAGTACCCTGCTAATGGAACATTAGAGGAGCATTTGAATCATGAATTCAAAGGAAATAATGGAATTGGTTTGGATTGGTATAGAAGATTGATCATAGCTACTGAAACAGCTTACATTCTTGCATTCTTGCACTATGAGAATTCCCCTCCAATTTTCCACAACAATCTAAAATCTGGCTGCATTTTCTTGGATGATGATCTCTCAGTCAAGATCGCCGGCTTCGGCCTACTCAATTCTAAATTCAAGTATGAATCTCATCACTTTTGCAAGAATGATGTCTATGACATGGGATTGCTTCTACTTGAGATCATCTCTGGCTCAAACTCGACTCACCAGAAGTCGGCTTTGGAGAAAATAAGGGATGGGAAGCTAGAAGAGATTGTTGATCCTCTCCTTTCGTACCACGAGATGGCGCAGCTCCGGCGAGATCAGGTGCAGATTGTGGCAGACCTTGCAACAAGGTGTATGCTATTTGGTGGAGATGGAAAGATTGGAATGGTTGATGTTGTAAGAGAATTGGTGCACATAACAAAACAGAGTGGTGATGCTGCCAATTTGGATTTCTTGGAGGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATTTCAATGTCTCCTGATTCTATCATTATTCATTGA 1908 0.4051 MMHIIIGLELLVFLPFSCSLQPPNLLPNPCNETCGKLHVPFPFFVNSSCASISTSFNLSCSNSSNLFLKIDSQSYKVLEFFNDGLLVDFPAGASSSSTCRMYNDLNSFGKSFEGKDEDQYGISLDNVVGLYDCDDSSVCKPDCETIELPGCDGSGNNLGCCYPLSDHSIWHSGEGFSVFSEFGCRGFSSWAVLRGSNSGKHGVKLEWGVPLKKNSSSMEKVCDLNAEMVNATSVQGAVRCVCQDGFLGDGFLNGSGCLQSCIKNGQEAYGDNCYIKKHDQREMLIIVGILGPFLIVASLIALFYLLKKPATKPGMFDTEHAYYHSISFRKPNRTRLFSHHDLDKATKGFEEGQKLMSGLAGSIFAGVLGDGSHIAVQKLKCENEKDIIQLVSQIEILSNIVHRNMACVLGCCIESSYTPLVVYEYPANGTLEEHLNHEFKGNNGIGLDWYRRLIIATETAYILAFLHYENSPPIFHNNLKSGCIFLDDDLSVKIAGFGLLNSKFKYESHHFCKNDVYDMGLLLLEIISGSNSTHQKSALEKIRDGKLEEIVDPLLSYHEMAQLRRDQVQIVADLATRCMLFGGDGKIGMVDVVRELVHITKQSGDAANLDFLEETFSNSSLLQMISMSPDSIIIH* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0402 635 Pfam Wall-associated receptor kinase galacturonan-binding 30 80 IPR025287 GO:0030247
Ahy2g0402 635 Gene3D Transferase(Phosphotransferase) domain 1 507 601 - -
Ahy2g0402 635 SUPERFAMILY Protein kinase-like (PK-like) 328 596 IPR011009 -
Ahy2g0402 635 Gene3D Transferase(Phosphotransferase) domain 1 427 506 - -
Ahy2g0402 635 ProSiteProfiles Protein kinase domain profile. 349 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g0402 635 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 630 IPR045274 GO:0007166
Ahy2g0402 635 PANTHER OS10G0351500 PROTEIN 39 630 - -
Ahy2g0402 635 Gene3D Phosphorylase Kinase; domain 1 322 425 - -
Ahy2g0402 635 Pfam Protein tyrosine and serine/threonine kinase 351 504 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0402 Ahy-Chr2 5488241 5491355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0402 29 599 Receptor kinase-like Gene Family AT2G23450 29.147 1.07e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Ahy2g0402 PK_Tyr_Ser-Thr 2.70E-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0402 - - gmx:100779880 826.624