Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0401 ATGATGGACGCGTACTCCTCTGGAGAGGAAGTGGTTATTAAGACTAGGAAACCTTATACAATCACCAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAACCGATTTCTAGAAGCTTTGAAGCTCCATGGGCGGGCATGGCAGCGAATAGAAGAGCATATTGGAACAAAAACTGCCGTGCAGATCAGGAGCCATGCGCAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCAGGCAAAGGGTGTTCCAATTGGACAAGCTCTTGACATAGAAATCCCCCCTCCACGACCCAAAAGAAAACCGAGCAATCCTTATCCTCGGAAGACCAGTGCTGGTGCCGCATCATTGCATAGTGGAGCAAAGGATGGAAAACTCAGTTCTCTTGAATCTTCACATGCTAAACAAGCACTGGACTTGGAAAAGGAACCTGTTCCAGAGAAACATAATGGAGACAAAGTGTCACATGTAAAAGAAAATAAGGATGAGAACTGCTCTAAAGTATTTGCTCTTCTCCAGGAGTTACCATGTTCTTCGGTTTCTTCAGCAAACAAGAGTTCAATATCGTGGTCAGTGCCACTGCAAAATTCATGCGGCTTAAGGGAGATTATACCTTCAGTGAAAGAGGTAATAGCGAAAGATGGAACAAATAAATCTTTTGTTACTATTGAACTTGAAAATCGGAAGTTGGAGATAGATGATGGGAAGCAGACTAATGGAAACTCCAGTTTGGAGAATTCTGATACAGTGAAATTGGTTCAAAATGAAAAAACAGATGGTCTTAACTGTGAACTAACCATAGATGGGATACAAGGCAATCAGAATTATCCGAGACATGTTACTGTGCACGTTGTTGATGGGAAACTCGGAACAAGTACTGCAAATCCATCCCAAGATATGGTGTTTCAAGATTCTATGTTTCAGCCACTAGGAGGGATTAATGGGCAACCTAATCTTTTCACCAATTCAACCGCATCAAACACGAGCGAGAGCCAAAACAACACAGAGAGATCTTCTGTTCATCAATCATTTCTTCCTTACCCTCCCTTCATACAAAATAATCAAGGCGATTACCAATCATTTCTTCAAATGTCTTCCACATTTTCAAGTCTTATTGTGTCTACCTTGCTGCAAAACCCAGCAGCACATGCTGCCGCAAGTTTTGCAGCTACTTTCTGGCCCTGTGCAAATTCAGAAGCTTCAGCAGATTCTCCTACGTGCTCTCAAGGAGGTTTTCCACCCAGACAGAATGGCTCTCCTCCAAGTGTGGCGGCTATTGCAGCCGCCACTGTAGCTGCTGCAACTGCATGGTGGGCTGCCCATGGACTGCTTCCTCTGTGTGCTCCACTCCATACTGCTTTTGCTTGTCCTCCAACATCAATGCCTGCAGTTCCATCAATCAATACTGGTGAAGCACCAGCACCAGCACCGGTACAAGAACCGGCACCAATACCAACATCAGAGACAGAACAAGAGAAGAATAGTCTGCAAAATCCTCCTCAGCAGGACCAGACACTTGATCCTGTATGCTCGGAAGCTCAACAAGCACAACAGTCACCTTCTAAGTCCCCAGTTGATATCTCATCAGATTCTGAGGAGAGTGGAGATGCCAAGTTACATGCTTCGCCGTCCAAGGCTACTGATCAAGAGTTGAACAAAGAAATATCCGAGCACATTGATTCCAACAAAGCAAAAGGTAGAAAACCAGTTGACCGATCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAATTGGAGACTGATGCATTAGAGAAGGATGAGCAAGGGAAGGAAGAGCCTGAAACAGCTGATGCTAACAATTTAGCCATTGACTCTAGTAATCGTCGTAGTAGAAGTGTTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAGGAGGGGCGACTGGCCTTTCAGGCTCTCTTTGCCAGAGAGGTGTTGCCACAAAGCTTTTCGCCTCCGCCCGATTTGCTAAACAAGGATCAGGAAATGGACAGCATCAAGGATAACAAGCAAACCACAGATATCAAGGATGAAGGCCAAGACAGCAAGAAATGCAGTTCTATTTTCGAGGGTATTCAGAAAATGATGCCATGTATAGAGAATAATGAGGAAGAGGGACTGCTAACCATAGGACTTGGACAAGGAAAGCTCAAGACTCGTCGAACCGGCTTCAAACCTTACAAAAGATGTTCAATGGAGGCCAAGGAGAACAGGGTTGGAAGCACGGGGAACCAAGGTGAAGAGCAAGGGTCAAAGAGAATACGCTTAGAAGGGGAGGCTTCAACTTGA 2289 0.4513 MMDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAQAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTSAGAASLHSGAKDGKLSSLESSHAKQALDLEKEPVPEKHNGDKVSHVKENKDENCSKVFALLQELPCSSVSSANKSSISWSVPLQNSCGLREIIPSVKEVIAKDGTNKSFVTIELENRKLEIDDGKQTNGNSSLENSDTVKLVQNEKTDGLNCELTIDGIQGNQNYPRHVTVHVVDGKLGTSTANPSQDMVFQDSMFQPLGGINGQPNLFTNSTASNTSESQNNTERSSVHQSFLPYPPFIQNNQGDYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPCANSEASADSPTCSQGGFPPRQNGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPTSMPAVPSINTGEAPAPAPVQEPAPIPTSETEQEKNSLQNPPQQDQTLDPVCSEAQQAQQSPSKSPVDISSDSEESGDAKLHASPSKATDQELNKEISEHIDSNKAKGRKPVDRSSCGSNTTSSSELETDALEKDEQGKEEPETADANNLAIDSSNRRSRSVSNLTDSWKEVSEEGRLAFQALFAREVLPQSFSPPPDLLNKDQEMDSIKDNKQTTDIKDEGQDSKKCSSIFEGIQKMMPCIENNEEEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGSTGNQGEEQGSKRIRLEGEAST* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0401 762 MobiDBLite consensus disorder prediction 465 628 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 585 600 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 317 345 - -
Ahy2g0401 762 Gene3D - 27 74 - -
Ahy2g0401 762 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Ahy2g0401 762 PANTHER PROTEIN LHY 3 744 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 483 527 - -
Ahy2g0401 762 PANTHER SWI/SNF COMPLEX-RELATED 3 744 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 660 681 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 605 626 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 84 158 - -
Ahy2g0401 762 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 23 72 IPR006447 GO:0003677
Ahy2g0401 762 CDD SANT 27 70 IPR001005 -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 734 762 - -
Ahy2g0401 762 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Ahy2g0401 762 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Ahy2g0401 762 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Ahy2g0401 762 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 647 681 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 134 158 - -
Ahy2g0401 762 MobiDBLite consensus disorder prediction 549 569 - -
Ahy2g0401 762 SMART sant 24 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0401 Ahy-Chr2 5462557 5469221 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy2g0401 Myb_DNA-binding 2.10E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0401 K12133 - gmx:100101859 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0447 12 6913001 6919679 Ahy2g0401 2 5462557 5469221 hybridization