Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0398 ATGGCTCCATCATTAGAGAGCAATAAAAATGTTGTTATTGATGATGAATCCAGTAAGAATCTTCTTAAAGAAGAAGAAGAAGATGGAATGCTTTTTGCAATGGACTTGGGGGTTTTAGTGGCGTTTCCAATGGCTGTTAAGACTGCATTTGAGCTTGGAATCTTTGACATAATAGCCAAAGGTGGTGAACATGCAAAGTTCTCATCTGAAGACATTGCATCAAAGATTGGTAGCACAAATCCTAATGCACCATCAATGGTGGATCGTCTTCTTAGGCTACTTGCAAGTCATTCTTTGTTGTCTTGTTCATCACTTCCTCAAGTCACCAAAGATGAAGATGATCAAGAACATGGGGTTATTGCATCTCCTCAGAAGACTGTGTATAGTCTTACAGCTGCTTCCAAATATTTTGTAACTGATGATGATGGTGTCAATTTTGGACACACTTTGAGCTTGATTCTGGACAAAGTTGTCTTGGAAAGCTGGAGTGAACTGAAAGGAGCAATATTGGAAGGAGGTGTGCCATTTGTTAGGGCTAATGGGATGCACACATTTGAGTACCCAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGATAAGCCACACAACCATAGTGATGAAGAGGGTTCTTGAGTCCTATGAAGGTTTCAACAACATTAACACTCTAATTGATGTTGGTGGAGGTCTTGGTATCAATCTCAAAATGATCACTTCCAAATATCCAAATATCAATGCTATTAACTTTGACTTGCCTCATGTAATTCAACATGCCCTCACCTATCCCGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTGGACACAATGGTTCCGGTTTTGCCGGAGAATAAAACCGCCGCTAAGGTTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACATGACTTCATTCATTTGGCCACTCTTTCTGGATTTTCTTCCATCAAATTTGTATGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 1158 0.3981 MAPSLESNKNVVIDDESSKNLLKEEEEDGMLFAMDLGVLVAFPMAVKTAFELGIFDIIAKGGEHAKFSSEDIASKIGSTNPNAPSMVDRLLRLLASHSLLSCSSLPQVTKDEDDQEHGVIASPQKTVYSLTAASKYFVTDDDGVNFGHTLSLILDKVVLESWSELKGAILEGGVPFVRANGMHTFEYPSVDPRFNDVFNKAMISHTTIVMKRVLESYEGFNNINTLIDVGGGLGINLKMITSKYPNINAINFDLPHVIQHALTYPGVKHVGGDMFESVPNGDAIFMKWILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDTMVPVLPENKTAAKVAFKADLLMMTQNIGGKERTKHDFIHLATLSGFSSIKFVCSVSGYWVMEFYK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0398 385 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 385 - -
Ahy2g0398 385 Gene3D Vaccinia Virus protein VP39 138 385 IPR029063 -
Ahy2g0398 385 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
Ahy2g0398 385 PIRSF O-mtase 12 385 IPR016461 GO:0008168
Ahy2g0398 385 Gene3D - 12 137 IPR036388 -
Ahy2g0398 385 SUPERFAMILY "Winged helix" DNA-binding domain 24 140 IPR036390 -
Ahy2g0398 385 PANTHER O-METHYLTRANSFERASE 1 385 IPR016461 GO:0008168
Ahy2g0398 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 384 IPR029063 -
Ahy2g0398 385 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 385 IPR016461 GO:0008168
Ahy2g0398 385 Pfam O-methyltransferase domain 162 367 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0398 Ahy-Chr2 5383996 5387990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0398 26 385 Monolignol Biosynthesis Gene Families AT5G54160 49.722 9.62e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0398 K13066 - aip:107624476 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0440 12 6792104 6796162 Ahy2g0398 2 5383996 5387990 hybridization