Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0391 ATGGAGAGCCTCCAAGGACCCCTCAATTCATGTTTCTTTGGTGAGTCACATTTGGAATTGAACTATTTAGAGCAACAAGGTTTGGTTTTGGATTCAGAATCAGCATTGAGGCTTGAAGAAGAAGAACAAGTCTTAATGATATCAAGCTTAGAAGATAACATGCCATTCCTTCAAATGCTTCAAAGTGTGGAATATTCTCCAAACTACTCATCACAACAACAATGCTTCTTCCCTTTCAAAGATCCAACAAACTTTCAAACTCTTCTAAGGCTTCAACACTTGAAAAACCATAACAACAACAACAACAACAACAATAATAATAATGTTCAAGAACTTGATCAAAAGAGTTGTGTCACACATGATGTCATGGTAGAGATGCAACAACAACAACAACAACAATCACATTCACCAGTGAAATCTGAGAGCTATGAGCTTCATCAACAACACCACCAAACTTCAGCCTCAGCTTCATGTTGTGTTGAGAATAATAATAACAACACCACACCAACAAAAGCTGTTACTGCTGCTATTGAGAAGTGTGGTGGAAGAGGAAATAGCAACACTCAAGAAGTGTGCCAGAAATCTCAACAGGTGGGAAGTGTTGCCACAACAACAACAAGGGAGAGGAAGAAGAGGAAGAGAACAAGGCCTGCAAAGAACAAAGAAGATGTGGAGAATCAAAGAATGACTCACATTGCTGTTGAAAGAAATAGAAGGCGCCAAATGAATGATCATCTCAGTGTTCTAAGGTCCCTCATGCCCCCTTCCTATATTCAAAGGGGTGACCAAGCTTCAATCATTGGAGGTGCAATTGATTTTGTGAAGGAATTAGAGCAATTGCTTCAATCCCTTGAAGCACAAAAAAGGATGAGAAGAAAGAACAATAATAATAGTAGTAACAAAAATGAAGATGCTCTTGGTTTTGGTTCTTCCTCTAATTCTTCTTCAACAACAAATGGTGGTTATGATGGAATAATGAGATCATCAACAACATCATTATCATTATTATCCACTGAAGAAGGAAACTTTGGTGGTGGTGGTGGTAATGGTGATGAATTAAAAGCTGAGAACAAATCAGAATCAGCAGAGATAGAAGTGACATTGATTCAAACACATGTGAACTTGAAGATTCAATGCAAAAGGAGGCATGGTCAATTGGTAAAAGCTATAGTTGCTTTGGAAGATCTTAGGCTATCAATTTTGCACCTCAACATTACTTCATCTTCTGATGATTCTGTACTCTACTCCCTCAATCTCAAGATTGAAGAAGGGTGTAGGCTAAGATCAGCAAATGAGATAGCTGAAGCAGTTCATCACATATTCAACTTCATTAATGGTTAG 1341 0.3803 MESLQGPLNSCFFGESHLELNYLEQQGLVLDSESALRLEEEEQVLMISSLEDNMPFLQMLQSVEYSPNYSSQQQCFFPFKDPTNFQTLLRLQHLKNHNNNNNNNNNNNVQELDQKSCVTHDVMVEMQQQQQQQSHSPVKSESYELHQQHHQTSASASCCVENNNNNTTPTKAVTAAIEKCGGRGNSNTQEVCQKSQQVGSVATTTTRERKKRKRTRPAKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRRKNNNNSSNKNEDALGFGSSSNSSSTTNGGYDGIMRSSTTSLSLLSTEEGNFGGGGGNGDELKAENKSESAEIEVTLIQTHVNLKIQCKRRHGQLVKAIVALEDLRLSILHLNITSSSDDSVLYSLNLKIEEGCRLRSANEIAEAVHHIFNFING* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0391 446 MobiDBLite consensus disorder prediction 184 224 - -
Ahy2g0391 446 MobiDBLite consensus disorder prediction 290 324 - -
Ahy2g0391 446 MobiDBLite consensus disorder prediction 184 204 - -
Ahy2g0391 446 MobiDBLite consensus disorder prediction 337 357 - -
Ahy2g0391 446 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 277 IPR011598 GO:0046983
Ahy2g0391 446 PANTHER MAX DIMERIZATION, MAD 25 445 - -
Ahy2g0391 446 PANTHER TRANSCRIPTION FACTOR BHLH70 25 445 - -
Ahy2g0391 446 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 293 IPR036638 GO:0046983
Ahy2g0391 446 MobiDBLite consensus disorder prediction 126 149 - -
Ahy2g0391 446 CDD bHLH_AtFAMA_like 229 289 - -
Ahy2g0391 446 Gene3D - 216 305 IPR036638 GO:0046983
Ahy2g0391 446 Coils Coil 274 297 - -
Ahy2g0391 446 Pfam Helix-loop-helix DNA-binding domain 227 278 IPR011598 GO:0046983
Ahy2g0391 446 MobiDBLite consensus disorder prediction 299 324 - -
Ahy2g0391 446 SMART finulus 232 283 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0391 Ahy-Chr2 5276888 5280935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0391 219 446 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 53.070 3.31e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy2g0391 HLH 4.20E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0391 - - adu:107473071 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0433 12 6628498 6632496 Ahy2g0391 2 5276888 5280935 hybridization