Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0387 ATGGATGATGAGGTTCAAGCTTTTACCGTTGCTGCTGCTCAGAACGATGACGGTGCAAGCACATCCAGAATGAAAGGGGAGCAAATCACGAAAAACGAGGACTGTAACGGTAACGGTGACGGTGAGGAAGTGATTAGGTGGGAGAAGATTCTGGCGCGGAGGGTGGTTAGGGTTTTGGTGGTTGAAGCTGATGACTCTACCCGCCACGTCATCACTGCCATTCTTCGAAAATGCAGTTATTCAGTTATTGCTGTTTCTGATGGATTAAAGGCATGGGAAGTATTGAAGAAGAAAGCAACAGACCTAGATCTCATCTTAACAGAAGTGGATTTGCCCGCAATATCCGGATTTGCACTCATTACTTTAATCATGGAGCATGATTTTTGTAAAAACATTCCTGTCATAATGATGTCTTCTCAAGATTCGGTTAACATGGTGTTGAAATGCATGCTAAAAGGTGCAGTCGATTTTCTTATAAAACCTGTTCGGAGGAATGAGCTTAAGAACTTATGGCGGCATGTGTGGAGAAGGCACGCGATTGACAAACCCCCTCAAACTACGACATTTCCAATGGAAAAACTTAAGACTGTTTCGCAAGACAATTCTACAAGCAATCAGTCTAGTGCTTTTGTGGCTTCTTCGCAAGAAAATAATGGATGTGGTGAAAATTTGAGTGAAGCTCATAGCACTTGCACTTTGTCATTTTTGGAAGCTGAGAACGCATGCATGAAAAAACGGCAAGATGCCTCTGAATTGAAATTGAGTAATGTTGATGTGGGGCACCATGAGGTCAACCATGAAAGTAAATCAAGTAAGCATAATGATGAAATAGTGGGACTCGTATCAGAGTCTGCAATCAGCAACAAATCTCTTAAATTGACAGATTTAATGATAGAAAGAGACCATTGTTTTGCTGAAACCAAAAGCCAAGATGGAGTTCTAAGAGCTGAATCAAGCAGAGCCAATCCTAATATTAATGTAGCGATTCATGGTTGTACCGGTTCAGTGGTGGAGCCCTCTAGAGGAGTTACTGACTGGATGATTGACACATTTGAGAATATCGAAAAACCTATCAATGAAAACTGTAGTTATAGTGGTGATAATACAACCAAGTCTGTTTCAGATACAAAAATGGAACTTTTGTTAAGAAGAGATCTTTCTGATAGCTCATGTAAACATGCTAGTGAGATAACTGAGGAAAGACAAATATTGAAACATTCGGACACGTCTGCTTTTTCTAGGTATAGCGGTGATAAATTGTTGCAGCCTTCTTTTCCGTTACCTTTGATTACCTCTTCCAAAGTAACCAACAATGATCAAAATTCTCAAGAATCTCATAAATCATCTGGAAATACTCTAGATACTTCTTGTCAGTATGGAAGCACAGGCAAAAATGAAGAGAACAGGTCCACTCTGGTCATTGGTCAGTATGGACAATTCGAACCAAAATCATCAAGCAATGAATGTGGACTCTTCCCTTTCAGCAAGGCTACTTCTGATATTAAGTCTAAGGAACAATGTAACATTCTATCCTCTACCGGACAGAGTTCGGGTAATAGTTTATCTTCTGATGCTGCAAAAAATAAAAGTAGTATCGCCTATGAAAGCGTAGGCAGTGGAAGTGATGGAAATGATACTTTGAATGTGGTAACCAAGAACAATCCTGAAACTTTTAGCGAGTGTGTTCGCCAAAACTATGATGGATTTGGAGGAACAAACTTTCATCACTTTAGTCAAAGACAAGCGGCCCTAACAAAGTTTCGACTAAAGCGAAAACAGAGATCCTATGGGAAAAAGGTTCGATACGAAACCAGGCAAAGATTGGCCGAGCAGCGCCCTCGAGTGAAAGGGCAGTTTGTCCGTAAAGTACTAGATGGTGATCCAGTACCTGACGCTGGTGGCAATTCGTAA 1911 0.4076 MDDEVQAFTVAAAQNDDGASTSRMKGEQITKNEDCNGNGDGEEVIRWEKILARRVVRVLVVEADDSTRHVITAILRKCSYSVIAVSDGLKAWEVLKKKATDLDLILTEVDLPAISGFALITLIMEHDFCKNIPVIMMSSQDSVNMVLKCMLKGAVDFLIKPVRRNELKNLWRHVWRRHAIDKPPQTTTFPMEKLKTVSQDNSTSNQSSAFVASSQENNGCGENLSEAHSTCTLSFLEAENACMKKRQDASELKLSNVDVGHHEVNHESKSSKHNDEIVGLVSESAISNKSLKLTDLMIERDHCFAETKSQDGVLRAESSRANPNINVAIHGCTGSVVEPSRGVTDWMIDTFENIEKPINENCSYSGDNTTKSVSDTKMELLLRRDLSDSSCKHASEITEERQILKHSDTSAFSRYSGDKLLQPSFPLPLITSSKVTNNDQNSQESHKSSGNTLDTSCQYGSTGKNEENRSTLVIGQYGQFEPKSSSNECGLFPFSKATSDIKSKEQCNILSSTGQSSGNSLSSDAAKNKSSIAYESVGSGSDGNDTLNVVTKNNPETFSECVRQNYDGFGGTNFHHFSQRQAALTKFRLKRKQRSYGKKVRYETRQRLAEQRPRVKGQFVRKVLDGDPVPDAGGNS* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0387 636 MobiDBLite consensus disorder prediction 431 465 - -
Ahy2g0387 636 Gene3D - 56 309 - -
Ahy2g0387 636 SUPERFAMILY CheY-like 57 185 IPR011006 -
Ahy2g0387 636 SMART REC_2 56 171 IPR001789 GO:0000160
Ahy2g0387 636 Pfam CCT motif 580 622 IPR010402 GO:0005515
Ahy2g0387 636 ProSiteProfiles CCT domain profile. 580 622 IPR010402 GO:0005515
Ahy2g0387 636 PANTHER TWO-COMPONENT RESPONSE REGULATOR 257 512 IPR045279 GO:0009736
Ahy2g0387 636 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 255 IPR045279 GO:0009736
Ahy2g0387 636 PANTHER TWO-COMPONENT RESPONSE REGULATOR 512 611 IPR045279 GO:0009736
Ahy2g0387 636 PANTHER PRR RESPONSE REGULATOR 40 255 - -
Ahy2g0387 636 Pfam Response regulator receiver domain 58 169 IPR001789 GO:0000160
Ahy2g0387 636 ProSiteProfiles Response regulatory domain profile. 57 175 IPR001789 GO:0000160
Ahy2g0387 636 PANTHER PRR RESPONSE REGULATOR 257 512 - -
Ahy2g0387 636 PANTHER PRR RESPONSE REGULATOR 512 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0387 Ahy-Chr2 5211935 5215820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0387 563 623 Response Regulator Gene Family AT5G24470 60.317 2.23e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Ahy2g0387 Response_reg 8.60E-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0387 K12130 - gmx:100791698 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0430 12 6554705 6558617 Ahy2g0387 2 5211935 5215820 hybridization