Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0381 ATGGCTAAAAAAAAATTATTCCAGATGGTGGATTGTAACAACAATACAAGGAAACACAATGATTCAAGTTCTAACAAAATATTTGTTGGAGGGTTGGCTTGGGAGACTCAAAAGGAGACACTGAGAAGATATTTTGAGCAATTTGGAGATATTATAGAGGCTGTTGTCATAACAGACAAGAACACTGGAAGGTCCAAGGGTTATGGCTTTGTCACATTCAAGGATCCAGAGGCAGCAAAGAAAGCATGCCAAAATCCATCTCCAATAATTGATGGGAGAAGGGCAAATTGTAATATTGCATCAACTGCTGCAAACAAGAAACACTCATCACAAACTCCTCAACATGAAAGGTTTAAACCAGTGGCTGGAATATTGGCTTCACCTTCTCATCATCATTTTGTTCCTTCATCAACATTTTTCCATCAACCTAATGAACAATTCAGAATTCCTTATCCAACTTATAGATATAATGGATACTCACAAGAAACAATGGTCCCTATGAATTGTTATGCTATCTATGGAGGTCAACAATTCTCACCTTACTACCCTTCCAATAATGGGGCAATAGGGCCATTAGGGTTTATCCCTAATATTTACCCTTTGAATGCTCAATATGCACATAGATATCATAGTCATCAAGGTCATGGTTTTAGGGTTCAATATCCACAAATGATGCAAATTCCAGTTTTACCCCCTAGAAGACCATATGGCTCACCTGGTATCTTGACTTTTCCTCCTTCAATGCCAACACCACCAATTACTAATTCAGGGACAAGAACTGCTATTAAAAAAACAGAAGTGGCAACAAGAAAAGGTGCAAGTGCTTCAAGACCCAAAAGAACTTCTTCTATCTAA 855 0.3789 MAKKKLFQMVDCNNNTRKHNDSSSNKIFVGGLAWETQKETLRRYFEQFGDIIEAVVITDKNTGRSKGYGFVTFKDPEAAKKACQNPSPIIDGRRANCNIASTAANKKHSSQTPQHERFKPVAGILASPSHHHFVPSSTFFHQPNEQFRIPYPTYRYNGYSQETMVPMNCYAIYGGQQFSPYYPSNNGAIGPLGFIPNIYPLNAQYAHRYHSHQGHGFRVQYPQMMQIPVLPPRRPYGSPGILTFPPSMPTPPITNSGTRTAIKKTEVATRKGASASRPKRTSSI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0381 284 PANTHER BOULE-RELATED 1 259 IPR037366 GO:0003729
Ahy2g0381 284 SUPERFAMILY RNA-binding domain, RBD 15 104 IPR035979 GO:0003676
Ahy2g0381 284 PANTHER - 1 259 - -
Ahy2g0381 284 Gene3D - 8 120 IPR012677 -
Ahy2g0381 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
Ahy2g0381 284 SMART rrm1_1 26 98 IPR000504 GO:0003723
Ahy2g0381 284 CDD RRM_RBM24_RBM38_like 26 100 - -
Ahy2g0381 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 85 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0381 Ahy-Chr2 5165967 5171411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0381 21 101 C2H2 Transcription Factor Family AT2G19380 44.444 7.80e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0381 - - ahf:112729575 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0424 12 6498949 6508161 Ahy2g0381 2 5165967 5171411 hybridization