Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0372 ATGGGAAAAAAAGGAAGTAGTAGTAGTAGCTCATGGTTGACTGCAGTCAAAAGAGCATTCAGATCTCCAACAAAAGATACTGAAAAGAAAAGAAGCAATAGAAGAAGAAGTGAAGAAAGCTTTGATCAAGAAGAAGAAGAAGATAAGAGAGAAAAGAAAAGATGGATTTTTAGAAAAGCTGTGAATCATGAAAGCAACAACAATAACAACACTAATCAACAAAACCCAACAAAGTTGAAGCATAATCATAATCAAAATCATCATAATCATGATGTGGCTGCAGCAGCAACAACTGCTACTACTAATAATTGTTCTACAACAACAAGTGGAGGATCAAGAAGTGAACAAGATCAGAAGCATGCTCTTGCAGTTGCTGTGGCAACAGCTGAAGCTGCCATGGCAACTGCTCAAGCTGCAGTTGAAGCTGCAAGGTTGAATAACCCTAATAATAATCCTACTAATAGTAATAATAATGGTGCTGCTAATTACCATCATCATCATGCTAGGGTGCATTATTCTGCTATAGTGATTCAAACAGCTTTTAGAGGATACTTGGCAAGAAGAGCACTAAGAGCATTAAAAGGGTTGGTGAAATTGCAAGCATTGGTAAGAGGACACAATGTAAGAAAACAAGCAAAGATGACACTAAGGTGCATGCAGGCACTTGTTAGGGTCCAAGCAAGGGTTCTTGATCAGAGAATAAGGTCTTCATCACATGATGGAAGCAGAAAATCCACATTCAGTGACACTGCTAGTGTTTGGGATCATTCCCGGTATCTTCAGGATATTTCTGATAGAAAATCACTATCAAGAGAAGGAAGCAGCATTGCAGATGATTGGGATGAACGTCCTCACACAGTTGAAGAAGTGAAAGCAATGTTGCAACAGAGAAAGGAAGCTGCCATGAAAAGGGACAAGTCCTTAACTCAAGCTTTTTCCCAGCAGATATGGAGGAATGGAAGAAAATCGTCAATTGGAAACGAAGATGAGCTTGAAGAAAGGCCTAAATGGCTCGACCGATGGATGGCCACGAAGCCTTGGGAAACAAGGGGAAGAGCTTCAACTGACCAAAGAGATCCAATTAAGACAGTGGAAATTGACACCTCGCAGCCTTACTCGTACCTTGGAACCAATTACAGGAGATCACATCCAAACTATCAATATAACCCTCACCACCATCAACCTCAAAGGCATTCCATCGCTTCACCGCTACATAGATCACACCAAAATGGATCCCTTCACCCCTCCACTGCAACACCATCCCCAGCAAAATCTAGGTCGATACAAGTCCGGTCTGCGAGCCCTCGGTGTGTTAGAGATGATAGAAGCTACCACACTTCTCAGACACCAAGCTTGAGGTCTAATTATCATTACACCGGTAGCTTGTGTCAAAATGGCGGTCGAGCCGGAACAAGCAGTGGTGGTAGTGGTACATTGCCTAATTACATGGCAGCAACCGAGTCTGCGAAGGCTAGGATTCGGTCACAGAGTGCGCCAAGACAAAGGCCGTCCACGCCAGAGAGGGATAGAGTTGGTGGTGCAAAGAAAAGGCTCTCTTTTCCTGTTCCTCCTGATCCATATAATGTAGGAATAGGGTATGGAAATTATGGGCATAGTTTGAGGAGTCCAAGTTTCAAGAGCGTGAGTGCTTCACATTTTGGGTTGGAACAACAATCCAATTACTCTTCTTGCTGCACTGAGAGTCTTGGTGGTGAGGTTTCTCCTTCTTCAACTAGTGATCTTAGAAGGTGGTTGAGGTAA 1761 0.4287 MGKKGSSSSSSWLTAVKRAFRSPTKDTEKKRSNRRRSEESFDQEEEEDKREKKRWIFRKAVNHESNNNNNTNQQNPTKLKHNHNQNHHNHDVAAAATTATTNNCSTTTSGGSRSEQDQKHALAVAVATAEAAMATAQAAVEAARLNNPNNNPTNSNNNGAANYHHHHARVHYSAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSSHDGSRKSTFSDTASVWDHSRYLQDISDRKSLSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKSLTQAFSQQIWRNGRKSSIGNEDELEERPKWLDRWMATKPWETRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPHHHQPQRHSIASPLHRSHQNGSLHPSTATPSPAKSRSIQVRSASPRCVRDDRSYHTSQTPSLRSNYHYTGSLCQNGGRAGTSSGGSGTLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGGAKKRLSFPVPPDPYNVGIGYGNYGHSLRSPSFKSVSASHFGLEQQSNYSSCCTESLGGEVSPSSTSDLRRWLR* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0372 586 MobiDBLite consensus disorder prediction 21 60 - -
Ahy2g0372 586 MobiDBLite consensus disorder prediction 487 521 - -
Ahy2g0372 586 MobiDBLite consensus disorder prediction 348 457 - -
Ahy2g0372 586 SMART iq_5 169 191 IPR000048 GO:0005515
Ahy2g0372 586 SMART iq_5 192 213 IPR000048 GO:0005515
Ahy2g0372 586 MobiDBLite consensus disorder prediction 61 80 - -
Ahy2g0372 586 Pfam IQ calmodulin-binding motif 173 191 IPR000048 GO:0005515
Ahy2g0372 586 Pfam IQ calmodulin-binding motif 197 213 IPR000048 GO:0005515
Ahy2g0372 586 Coils Coil 126 146 - -
Ahy2g0372 586 MobiDBLite consensus disorder prediction 563 586 - -
Ahy2g0372 586 ProSiteProfiles IQ motif profile. 171 198 IPR000048 GO:0005515
Ahy2g0372 586 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 7 586 - -
Ahy2g0372 586 PANTHER IQ-DOMAIN 5-RELATED 7 586 - -
Ahy2g0372 586 MobiDBLite consensus disorder prediction 348 363 - -
Ahy2g0372 586 ProSiteProfiles IQ motif profile. 194 221 IPR000048 GO:0005515
Ahy2g0372 586 MobiDBLite consensus disorder prediction 1 85 - -
Ahy2g0372 586 Pfam Protein of unknown function (DUF4005) 434 535 IPR025064 -
Ahy2g0372 586 Gene3D - 167 221 - -
Ahy2g0372 586 MobiDBLite consensus disorder prediction 1 17 - -
Ahy2g0372 586 MobiDBLite consensus disorder prediction 364 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0372 Ahy-Chr2 4930951 4933832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0372 12 586 IQD Protein Family AT4G00820 55.312 1.26e-180 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0372 - - adu:107472901 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0411 12 6194955 6197649 Ahy2g0372 2 4930951 4933832 hybridization