Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0208 ATGGACGACGATTGGGATCTCCACGCCGTTGTTAGAGGCTGCGCCACCATTTCCTCCACCTCTTCCACCACCACTACCACCACCTCCACCACCACCACTTCCTACCAACCTCCACCTTCTTCTTCATGTGGGTTCTTTAACGAACAACAAAGCAATGTTTTTTCGGTTTCCAACAACAACCCTTTTGAATTAAGAAGCTCCATTCAGGAACTTCAGCATAATCATAATCTTTGCAAGCCTTTCTTCTTCAAATCACAGCCTTTTCAGTCTTTTCAATCCTCTTCTTCTTCATCATCACCACCCAATTCAGCTCTGACACAACATAAACAGCAGCAACAGAACTGTAATAACGGTAAGAACCCTCACCATGCAGGTTCAGCTACCACCCCACGATCTAAAAGAAGGAAGAATCAGCTTAAGAACGTTTGTCAAGTTTCAGCTGAGAATCTCTCCTCAGACGTATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGTTCACCATATCCAAGAGGATATTATAGATGTAGCAGCTCAAAAGGATGTTTGGCTAGAAAACAAGTTGAAAGGGACAGATCAGATCCAACAAAGTTCATAGTTACATTCACTGGTGTACACAACCACCCTGCTCCAACTCATAGAAACTCACTTGCTGGCTCTTCACGCCAAAAGCTACAAACACCTGAAATAGCCACTACAGGGGACACTGAAATGGTCCTCACAATGAAGCCGGTCTCGATTTCGGCTTCTCCTTCCACTTCAGGAGTGGAAGAAGAGGCTGAAACCGAGGCCACACCGGCGCAGAAGTCGGAGAGCGAAGAGGACAACATGGAGGATTATTTGATGAATGATGATGATGGTGGGCTTGAGGAAACTGAGTTTGGTTCACCAGATATGGAGATAACTGATGATTTCTTTGAAGGGTTGGATGAACTGACAACAGCCACTGATGGAGACTCATGCTTTTCAACAAGTGTTCCTAATCCTTCTCTTCCTCCTTTTGTGGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1044 0.4559 MDDDWDLHAVVRGCATISSTSSTTTTTTSTTTTSYQPPPSSSCGFFNEQQSNVFSVSNNNPFELRSSIQELQHNHNLCKPFFFKSQPFQSFQSSSSSSSPPNSALTQHKQQQQNCNNGKNPHHAGSATTPRSKRRKNQLKNVCQVSAENLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERDRSDPTKFIVTFTGVHNHPAPTHRNSLAGSSRQKLQTPEIATTGDTEMVLTMKPVSISASPSTSGVEEEAETEATPAQKSESEEDNMEDYLMNDDDGGLEETEFGSPDMEITDDFFEGLDELTTATDGDSCFSTSVPNPSLPPFVANSAATAAGGS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0208 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 347 IPR044810 GO:0003700
Ahy2g0208 347 Gene3D WRKY domain 135 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g0208 347 SUPERFAMILY WRKY DNA-binding domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy2g0208 347 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 347 - -
Ahy2g0208 347 MobiDBLite consensus disorder prediction 263 277 - -
Ahy2g0208 347 MobiDBLite consensus disorder prediction 20 42 - -
Ahy2g0208 347 MobiDBLite consensus disorder prediction 278 301 - -
Ahy2g0208 347 SMART WRKY_cls 151 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g0208 347 MobiDBLite consensus disorder prediction 206 226 - -
Ahy2g0208 347 MobiDBLite consensus disorder prediction 209 226 - -
Ahy2g0208 347 MobiDBLite consensus disorder prediction 248 301 - -
Ahy2g0208 347 MobiDBLite consensus disorder prediction 92 127 - -
Ahy2g0208 347 ProSiteProfiles WRKY domain profile. 146 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy2g0208 347 MobiDBLite consensus disorder prediction 92 137 - -
Ahy2g0208 347 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0208 Ahy-Chr2 2432672 2434511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0208 1 346 WRKY Transcription Factor Family AT4G01250 45.272 4.97e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy2g0208 WRKY 1.00E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0208 K13425 - gmx:100815829 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0179 12 3043457 3045318 Ahy2g0208 2 2432672 2434511 hybridization
Ahy14g2537 14 132203494 132206042 Ahy2g0208 2 2432672 2434511 PCT
Ahy4g2229 4 118493884 118496400 Ahy2g0208 2 2432672 2434511 PCT
Ahy2g0208 2 2432672 2434511 Ahy14g2537 14 132203494 132206042 PCT
Ahy2g0208 2 2432672 2434511 Ahy4g2229 4 118493884 118496400 PCT