Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0207 ATGGTGGACGAAGAAGGTGAATTCGCCGGCACAATTTGCTCCATTTGCTACGAAGATCTCAAACCAGTTTCCGAAGATCTTCAATCTATCTCCGTTTGCGGCCACGTCTTCCACGAGCTCTGCTTGCAGCAATGGTTCGAGTACTGTTCGAAAGCGAAGAAGCACACTTGCCCCGTTTGCAAGCAGAGTTGCAGGGTCGGCGATGCTTGCAGGCTTTACTTCCAATCGGTGGGAGATGTGGTCGAATCTGTTATGCATCGGAAGCCATTTGATTCCGAAGAAGATTCCGGAGTTTTGAGAAAGGAAGTGAACAGGTTGGAGGTCAGGCTTTCGGGGCTTAGTTCAGAGTTGGAGAAGAAGGGGAAGGAAATTGAGCAGCTCACGAAGGAGCTTGGTGCTTGCAAGGAGAAAGCAAAGATTGAAATAGCATTAAAAAATGAGGCCTTGAGTCAAAAAGCATCCATGCAAACCGAGCTTCGTATGAAGTCAGAGGAGCTTGAGAAGTCAACTTTTGAGTGCTATTCATTACAAAAAAGAAATATCACTTTGGCTAAAGAAATTGCGGCATTTAAATTAGTCTCTGATCTTGACCTTAATGAAGAGGAAGTTTTGAAGTATGCAACTTTGGGTAACGGGTTTAATGATAAAGATACGATAGACACATTGAGCAGATCTATGGTTCGGCGTAACAGGGATTACAAAGATCTAATAGCTAAACGCAATGAATTAGTGGCCAAGTGCAATCATCTAGAAAAGGGTGAGGCTCGGTACAGTAAAAAGCTTGAGAAGGCTAAGGAGAAGATTCTTAAATTGAAGGCTAGGGTACAAGAACTAGAGACAGCTGCAGAAGTAAGAGAGAACCATTATCTGAAGTCTTTGAAAGCTTCAAAGATGAATAAGTGTTCAAATAATCTTGAAAACAACCTCAGTTCTAAGAATGATGTACCCACGACCAGCAATACTCCATTAAATGAGCAAACTAAACAAACTTCACCCAAATCTGAAATGGACTTGAGTGTGAGCAACAGTAAATCTCTACAATTTTCAAGGATAGTCAACTGCATTCCTACCGAAAGTAAAGCTGTAAATGTTAGTAATGAAAATAAATCTACCCCTGCTCTTCGAAAAGAGAGGGATTTTATATCTCTTGATGCTGATGCTTCAGAATTTACTGAACCTTTGTCTGGAGGGTCAAGACGTGACTGCAATGATCGATACAGGGATGGTGCTGCTCTTAGCAAGCCTACTGTAGCCAAGTCAGATGCAGCATCCGAAAAGAAGGAAGAAACAGCAGCTCAAGGAACATGTAACTTGGCTGATTCTTCAAGAATTGACATTGATGTTGAAATGACGAAAAATGATGTCATTGATTTGGATGATGATATAACATTACTCGATAAACAAGTTCAACCCAAGGTTAATATTATAAAGGAGTCACCACCAATAATTGCAAATCCAGGGGACATTTGTTTTTCTGGCGGATTGCTTGGTCCTGATGGATCACATAGGTACTTGGGTAAATGGTGCAAGCGTAGAAAAAATGGCGAATCGCAATCGGTAGATGGAGGATTGATAGCTGTTGGGGCTGATGGTAGAGGTGGCAGAATTAAAGTTCTAAGGACCGCAGGCCAAACCTTCATGGATGACAAGGAAAATGACAAGGAATCAAAAAGGTTAAAGGTTGGACCTAAGAGAAGTAGTTTGCGACCCCAGGGATGTCTGCAGATAGATCACTTCTTTGGCAGGGTTAATCACTAA 1758 0.4192 MVDEEGEFAGTICSICYEDLKPVSEDLQSISVCGHVFHELCLQQWFEYCSKAKKHTCPVCKQSCRVGDACRLYFQSVGDVVESVMHRKPFDSEEDSGVLRKEVNRLEVRLSGLSSELEKKGKEIEQLTKELGACKEKAKIEIALKNEALSQKASMQTELRMKSEELEKSTFECYSLQKRNITLAKEIAAFKLVSDLDLNEEEVLKYATLGNGFNDKDTIDTLSRSMVRRNRDYKDLIAKRNELVAKCNHLEKGEARYSKKLEKAKEKILKLKARVQELETAAEVRENHYLKSLKASKMNKCSNNLENNLSSKNDVPTTSNTPLNEQTKQTSPKSEMDLSVSNSKSLQFSRIVNCIPTESKAVNVSNENKSTPALRKERDFISLDADASEFTEPLSGGSRRDCNDRYRDGAALSKPTVAKSDAASEKKEETAAQGTCNLADSSRIDIDVEMTKNDVIDLDDDITLLDKQVQPKVNIIKESPPIIANPGDICFSGGLLGPDGSHRYLGKWCKRRKNGESQSVDGGLIAVGADGRGGRIKVLRTAGQTFMDDKENDKESKRLKVGPKRSSLRPQGCLQIDHFFGRVNH* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0207 585 Pfam Ring finger domain 12 61 IPR001841 -
Ahy2g0207 585 SUPERFAMILY RING/U-box 10 65 - -
Ahy2g0207 585 SMART ring_2 13 60 IPR001841 -
Ahy2g0207 585 ProSiteProfiles Zinc finger RING-type profile. 13 61 IPR001841 -
Ahy2g0207 585 Coils Coil 103 137 - -
Ahy2g0207 585 MobiDBLite consensus disorder prediction 302 340 - -
Ahy2g0207 585 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 64 IPR013083 -
Ahy2g0207 585 CDD RING-H2 13 61 - -
Ahy2g0207 585 MobiDBLite consensus disorder prediction 549 568 - -
Ahy2g0207 585 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 583 - -
Ahy2g0207 585 MobiDBLite consensus disorder prediction 391 434 - -
Ahy2g0207 585 Coils Coil 247 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0207 Ahy-Chr2 2413303 2417294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0207 492 585 C3H Transcription Factor Family AT4G01270 40.594 1.30e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0207 K11985 - gmx:100812811 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0177 12 3015832 3019611 Ahy2g0207 2 2413303 2417294 hybridization