Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0199 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCCATCGAGAATCCACAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAAAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACAATTGCCTTTTGCGATACTGATTCTCCAATGCGGTATGTTGATGTTGGCATTCCTGCCAATAATAAGGGGAAGCACAGTATTGGTTGTCTTTTTTGGCTATTAGCAAGGATGGTTTTGCAGATGAGGGGTATTATTCGTCCAGGGCTTAAATGGGATGTGATGGTGGATCTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAAGCACCAGCTGCCCCAGAATATGCCATTCAAGACTTTGGTGCTGCTGGCATTGCCGGTTTCCCCACAGCTGATGGTGAATGGGCGGCTGTCACAGAACAACCCTGGCCCGAGGCAGTTCCACAACAACCTATTGCAGCTGCGCCTGCTGATTGGGCCCCAGATACTTCTGCAGGTGATTGGGAACCGGTTCCAGCTCCTCAGCCTTCTGTTCCGGCACCCGGAGCTGTTGCTCCCACTGGTTGGGAATAG 909 0.4983 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGIIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAAPEYAIQDFGAAGIAGFPTADGEWAAVTEQPWPEAVPQQPIAAAPADWAPDTSAGDWEPVPAPQPSVPAPGAVAPTGWE* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0199 302 SUPERFAMILY Ribosomal protein S2 13 203 IPR023591 -
Ahy2g0199 302 ProSitePatterns Ribosomal protein S2 signature 2. 122 146 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 MobiDBLite consensus disorder prediction 253 302 - -
Ahy2g0199 302 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 TIGRFAM uS2_euk_arch: ribosomal protein uS2 14 209 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0199 302 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 CDD RPS2 21 187 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PRINTS Ribosomal protein S2 signature 139 150 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PRINTS Ribosomal protein S2 signature 160 174 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0199 302 PANTHER 40S RIBOSOMAL PROTEIN SA 8 285 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0199 302 PANTHER 40S RIBOSOMAL PROTEIN SA 8 285 - -
Ahy2g0199 302 Hamap 40S ribosomal protein SA [rps-0]. 5 250 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0199 302 Gene3D - 17 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0199 Ahy-Chr2 2327592 2330197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0199 5 294 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 73.103 2.24e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0199 K02998 - gmx:100786575 465.692