Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0161 ATGGCTGCTGTTAGGTTTTCCCATTTAAAACGCCTCCAGAGTTCAATCAAGGGTTCTCTGAATGTTGAACTGTGTCACAATAGTGTGGATATGAATCTTGCAAGAAGTGCAAGGTTGCCTAGTGATTCACTTAGCAATGTTTATTACAAAAGGGAGTTACAGTCACCTCGAATTTTCACGAAGAATCAGTTTAGGAGTATTCCTTCTGAATGTCATGCAAGTAGTTCCCCTGTTATTACTAAACACAATGCATTAGTTTATCCTGGGTTGTCGCCTAGCTTTCGAATCCGGGGTGCTCTTCCTTTTGCTTCAATGAGCCCTGGGTTGAATTGCCGGACATTTTCGTCGGTTTTGGGTGGCAAAGGAAGCAGGGATCATAATGGCACAGAAATTGCTGCTGGTGCTGGTGATGATTCTGTTGTTGCTGGTGATCTAGCTGAGAAGGTGAAAGATACATGGAAGAGTGTGGTAGAGACAGCAACACATGCTGGAGAAAAGGTTAAAGAAGCCTCGGATGAGCTGACTCCGTATGCTCAACAGTTGCTTGATTCACATCCGTATCTTAACAAGGTGGTTATTCCAGTTGGTAGTACATTAACTGCTACTCTAGTAGCTTGGTTTTTGATGCCTTGGATTTTGAGGAAATTTCACAAATATGCAATGAAAGGCCCAATTTCTCTAATACCTGGAAGCACATCATGGGAACAAGTTACTTATGAGAAAAGCTTTTGGGGTGCTATGGAAGACCCAGTGCGATATTTAGTTACCTTCATCACATTATCACAGATTGGTGCAATGGTAGCTCCAACAACTATAACTTCACAATATCTTGTGCCGGCTTGGAGGGGTGCAGCGATTATTTCGTTTGTATGGTTTTTGCATAGATGGAAGACAAATGTTTTTCATCGTACCCTGTCCAATCAAGGTTTACTTGGACTTGACAGGGAGAAATTGCTCACTCTAGATAGAATCTCATCTGTTGGTCTGTTTATGATTGGTATAATGGCTTTGGCTGAGGCTTGTGGTGTGGCTGTGCAATCTATTGTAACTGTTGGTGGTATCGGAGGAGTTGCTACTGCTTTTGCTGCAAGAGATATCCTTGGCAATGTTTTCAGTGGTTTATCTATGCAGTTTTCCAGGCCCTTTTCAATAGGAGATACAATAAAAGCTGGCTCAGTTGAGGGTCAAGTGGTGGAAATGGGCCTTACTACAACATCGTTGCTGAGTACTGAGAAGTTTCCAGTCATAGTGCCGAATTCCTTTTTTTCTAGCCAGGTTATAGTGAACAAATCTCGTGCTGAGTGTCGTGGCATCATCAGCAAAATCCCTTTGCAAATTGAGGATTTAAGTAAGATTCCCCAGTTATCTGAGGATATAAAAAGCATGCTAAGATCACATGCAAAGGTGTTCTTGGGAAAAGAGGTTCCTTACTGTTTCTTGTCAAGAGTGGAAAGTTCATATGCAGAATTGACTATTGGATACAACCTCAAACACATGCGCAAAGATGAGTTATTTGCTGCAGAACAAGACGTTCTCCTGCATGCAGTTCAGGTCATTAAGAATCATGGGATAGCTCTTGGCAGCACATTGCCAGGTTGA 1599 0.4221 MAAVRFSHLKRLQSSIKGSLNVELCHNSVDMNLARSARLPSDSLSNVYYKRELQSPRIFTKNQFRSIPSECHASSSPVITKHNALVYPGLSPSFRIRGALPFASMSPGLNCRTFSSVLGGKGSRDHNGTEIAAGAGDDSVVAGDLAEKVKDTWKSVVETATHAGEKVKEASDELTPYAQQLLDSHPYLNKVVIPVGSTLTATLVAWFLMPWILRKFHKYAMKGPISLIPGSTSWEQVTYEKSFWGAMEDPVRYLVTFITLSQIGAMVAPTTITSQYLVPAWRGAAIISFVWFLHRWKTNVFHRTLSNQGLLGLDREKLLTLDRISSVGLFMIGIMALAEACGVAVQSIVTVGGIGGVATAFAARDILGNVFSGLSMQFSRPFSIGDTIKAGSVEGQVVEMGLTTTSLLSTEKFPVIVPNSFFSSQVIVNKSRAECRGIISKIPLQIEDLSKIPQLSEDIKSMLRSHAKVFLGKEVPYCFLSRVESSYAELTIGYNLKHMRKDELFAAEQDVLLHAVQVIKNHGIALGSTLPG* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0161 532 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 279 364 IPR011014 GO:0016020
Ahy2g0161 532 Gene3D - 381 429 IPR023408 -
Ahy2g0161 532 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 115 529 - -
Ahy2g0161 532 Pfam Mechanosensitive ion channel 324 525 IPR006685 GO:0016020|GO:0055085
Ahy2g0161 532 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 115 529 - -
Ahy2g0161 532 Gene3D - 280 380 - -
Ahy2g0161 532 SUPERFAMILY Sm-like ribonucleoproteins 365 430 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0161 Ahy-Chr2 1898395 1901812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0161 1 529 Mechanosensitive Ion Channel Family AT4G00290 55.056 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0161 K22047 - gmx:100814954 739.184