Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0157 ATGGACCAGCAGCTTCCCCAACCCGACCGCCACACTGCTCTTGCCGTCACCGCCGTTGCCACCAACCTCACCAGCAAGCGGATCCTTCAAAAGGACGGCCCCACCCCCGCCGGAACCATAAGGTACCGGGGTGTGAGGCGGAGGCCATGGGGACGTTATGCCGCTGAGATAAGGGACCCTCAAACTAAGGAGCGGCGTTGGCTGGGGACATATGACACTGCGGAGGAAGCCGCCCAAGCCTACGACTCCGCCGCCAGAGTCTTGCGTGGTCCCAATGCGAGAACCAACTTTGTGTATTATATTTCCCCTCCTCAACCTTCTTTCGTCTTCGTCACCAACAAAAACAACAATAAAAACATCCTTAACCGCAGTAGCCACTTCTTGGGAAGTCAGTTCAGCTTCCCCATCCATCCTAACCAACTCTTCAACAGACGTAACTGCCACTTGGGTGGTTCTTGGCCTGACCCCTTCTCCTCTTACTCCGCCCCTTCTTCATTTTCTACCTTCCAGCAACAGCGAAACCAGCAGCTTAACTCCACAAACATGCTTCTCCCCCATGACTTCGCAGCCCCTTCTGCTTCATCTTCCTTTGGCAAGGGCAGTTTGGTCAACTCATCACATGGTGGGCATGCTAATCCTTCTCCTTCATCTTCATTTAGTCCCCATTTATCCTACCCCAAGCGAAGTTTCAACTCACTTTCATCTTCATTTACCCACCGTTTATCCAACTCATCCCATGGTCGCAATGCTAATCCGCCTTTATCATACCCCAAGGGCAATTTAGTCAACTCATCACATGGTGGTAATGCCAAGCCTTCTGTTTCATCTTCCGTTAGCCACCATTTATCATACCCCAAGGGCAGTTTAGTCAACTCATCACATAGTGGCAATGCTAATAATCCTTCTCTTTCATCTTCCTTATCGTACTTCAAGGGCAGTTTAGTCAATGCTAATAACCACTCTGTTTCTTCCTCTTGA 978 0.5031 MDQQLPQPDRHTALAVTAVATNLTSKRILQKDGPTPAGTIRYRGVRRRPWGRYAAEIRDPQTKERRWLGTYDTAEEAAQAYDSAARVLRGPNARTNFVYYISPPQPSFVFVTNKNNNKNILNRSSHFLGSQFSFPIHPNQLFNRRNCHLGGSWPDPFSSYSAPSSFSTFQQQRNQQLNSTNMLLPHDFAAPSASSSFGKGSLVNSSHGGHANPSPSSSFSPHLSYPKRSFNSLSSSFTHRLSNSSHGRNANPPLSYPKGNLVNSSHGGNAKPSVSSSVSHHLSYPKGSLVNSSHSGNANNPSLSSSLSYFKGSLVNANNHSVSSS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0157 325 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
Ahy2g0157 325 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Ahy2g0157 325 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Ahy2g0157 325 MobiDBLite consensus disorder prediction 199 222 - -
Ahy2g0157 325 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Ahy2g0157 325 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 282 - -
Ahy2g0157 325 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Ahy2g0157 325 MobiDBLite consensus disorder prediction 236 301 - -
Ahy2g0157 325 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Ahy2g0157 325 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Ahy2g0157 325 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR1 37 282 - -
Ahy2g0157 325 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0157 Ahy-Chr2 1853604 1854581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0157 39 135 AP2-EREBP Transcription Factor Family AT1G24590 55.963 4.76e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy2g0157 AP2 7.10E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0157 - - ahf:112762063 583.563