Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0145 ATGGGTTTTCCGGTGGGCTACACGGAGGTTTTCTTCCCTCACCTCTTCCTCCGCTTACTCACCTTCCTCGGCCTCCTCCGTAACCTCGTCTTCCACCTCTTCCGCCTCCTCGGACTCTCCGAACTCCTCATCGACACCACCACCGACAACAACAACAACTACTACAACCACAACCCCAACCCAACCCGGACCCCCTCCGCCGTCGACCGTACGCCATCCCTCTCCGCCATCCTCATCCGCGAGTTCCTCCCCGTCGTAACCTTCAGAGAAATCCTCGCTAGCGATGACGTGGCATCGCCTCAACTAACTGGCAGCTGCGCGGTTTGCCTAACGGAATTAGTTATGGAGGACGAGATCCGGTGGTTGCGTAACTGCAAGCACGTGTTCCACAGGGAGTGTGTGGACCGTTGGATTGATCACGATCAGAAGACGTGTCCGCTTTGTAGGACGTCGTTTGTTCCTGATGAAATGGTTGATCAGTATAATCAACGGTTGTGGGCTGCTTCTGGTGTTAGTGAGTTCTACGTAGATTACACTTCTCTCTAA 546 0.544 MGFPVGYTEVFFPHLFLRLLTFLGLLRNLVFHLFRLLGLSELLIDTTTDNNNNYYNHNPNPTRTPSAVDRTPSLSAILIREFLPVVTFREILASDDVASPQLTGSCAVCLTELVMEDEIRWLRNCKHVFHRECVDRWIDHDQKTCPLCRTSFVPDEMVDQYNQRLWAASGVSEFYVDYTSL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0145 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 154 IPR013083 -
Ahy2g0145 181 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 179 - -
Ahy2g0145 181 SUPERFAMILY RING/U-box 79 155 - -
Ahy2g0145 181 PANTHER BNACNNG20990D PROTEIN 1 179 - -
Ahy2g0145 181 CDD RING-H2 106 149 - -
Ahy2g0145 181 Pfam Ring finger domain 105 149 IPR001841 -
Ahy2g0145 181 ProSiteProfiles Zinc finger RING-type profile. 106 149 IPR001841 -
Ahy2g0145 181 SMART ring_2 106 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0145 Ahy-Chr2 1618998 1619713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0145 1 180 C3H Transcription Factor Family AT1G63840 43.407 1.30e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0145 K16281 - gmx:100790975 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0095 12 1963414 1964418 Ahy2g0145 2 1618998 1619713 hybridization
Ahy14g2485 14 130227491 130228545 Ahy2g0145 2 1618998 1619713 PCT
Ahy4g2197 4 117496699 117497717 Ahy2g0145 2 1618998 1619713 PCT
Ahy2g0145 2 1618998 1619713 Ahy14g2485 14 130227491 130228545 PCT
Ahy2g0145 2 1618998 1619713 Ahy4g2197 4 117496699 117497717 PCT