Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0050 ATGGCTAGTGCAGTTGTTGGTCGAGCTTTCCTCTCTGGCTTCATTAAGATTATCGTTAACAAGTCCCTTAGAGAAGATGTGGTCAACGGGGTCTTGGGCAAGAAGCTTGGCTCTGACTTGCTTGAAAGGCTGAAGATTTCACTGCTTGCTGCTGAAGCTGTGCTTGATGATGCTGAGTACAAGCAACTGGGCGACGATAGTGTCAGGGATTGGCTCAACAGTCTGAGAGATGCTGTTTATGATGCTGATAACTTTCTGGACGCTGTCCTCACCAAAGCCTCCACAAAAAAGGAGGTACGTTCTTTGTTGCCTAGTTTCTTCCTCAACCGACATAGGAAGATGGTAGATAACATGGAAGGGGTGGTTTCAAGAATAGAATTTCTTGTTAAGCAAAAAGACATCCTTGGTCTTCAAAAGACTACCAAGGATAATAACTTGTCATCATCATCATCGTCATCATGGCGAGAAACCACATGTCTGATGGAAGGGAACATATATGGCAGGGAGGATGATCAACAAGCCCTAATCAAAACAATAAATGACAAGAGTGAATCTCAGTTATCTGTGATTCCTATTGTTGGCATGGGTGGGGTTGGTAAAACAACCTTAGCCAAATGGGTGTACAGTGTCGTGGAAGGATTTGATCTCAAAGCATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGATATTACAAAGAAAACCATTGAGGAGATTACTAAAAATTCTTGTACCCTCGGGAGTTTAAATTTGCTTCAAAATAAACTACAGGAAATGTTGTCGGGAAAGAAGTTCTTTTTTGTTCTAGACGATGTCTGGAGCGAAAATGCAGATAAGTGGAAGCAATTTATAACTCCTTTTCACTGTGGGGCTAAGGGTAGTTCAATTCTTCTAACAACTCGCAATCAAGAGGTTGCTTCAGTAGTTCAAACATGTCCCTCTTGCACTCTTAATGAGTTGTCCGAAGAGTCTTGTTGGTTATTGTTTGCAGCCAATGCATGTTTTCCGGAGTTAAACAGGAACCCAACATTAGAGGATGTGGGTAAAAAGATTGTGAAGAGGTGTAAGGGGTTGCCATTAGCTGTAGAAACAGTTGGGCGTTTGTTGCGAGGAAAGGATGATGTTAAAGAATGGAATGTTGTTTTAATGAATGACATTTGGGAACTGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGCGCTCTTTCGTTTATTGTTCATTGTTTCCCAAAGATCATAAGTTTGAGAAAGACGAACTAATTTTGCTGTGGATGGCTGAAGATCTTTTAAGGCTACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGGTTCTCAGTGTTTCGAAGAATTAGCTTCGAGGTTATTTTTTAAACCAGCGGAGTATCCTCGTGACAGGTACGTGATGCATGATCTTTTACATGACTTGGCAATATTCCTTGCTGGAGACTTCTATTGTAGAATAGAAGAGCGTAGTGAACAAGAAAAGAAGAAGGTTCTCACTCGCCATTTGTCATATTTGTCATCTTTGTCACATTTGTCATATGGAAGGTTAGATCATCCAATCTCAAAAGTCTTGTCCATTGTGAAATCAGAATCTTTGAGGACGTCTTTGTATATCGATGATTTGTTAAGCATGAAAAGCAGAGCATCAAAGTTGAAATACTTGAGAGTTTTATCCTTTCGTAAACTTAATGTATTACCAGATTCAATAGGTAAATTGATTCATCTACGCTATTTGAATCTCTCTTGGACCAAGGTTAAGACATTACCAGAGTCATTATGCAACTTGTTTAATCTACAAACATTGATATTGTATCAATGTTCTTACCTGACAATGTTGCCCAATGGCATGCATAAACTTGTGAATTTACGGCATCTTGATCTTAGGGGAACTTATTTGAAAGAAATGCCTAGAGGAATAAGTAAATTGAAACACATGCCTATTTTAGAATACTTTGCGGTAGGCAAGCACGAAGACAATGGAATACAGGAATTAGGAGGTCTCCCAAATCTTGAAGGATCAATTGCGATTAAGAAGTTGGAGAATGTTGTTAATGTGAGACAAGCAAGGAGTGCAAGGATGTTGGAGAAGAACCACATTGACAATTTATCGTTGGAATGGTCTTCAGGTAATAAGATGGTTTCAAACACAGAGACATTGAGAGATATACTCCACTGCTTGCAGCCGCACAATGGCTTGAACATGTTGAGAATATCGGGATACAAGGGCGAAAGATTTCCAGATTGGGTGGGGCACTGTTCTTACAACAATATAACATGGGTAACACTAGCATCTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAACTGCCATCTCTTGGGTACCTGCGCATTGAAGGTTTTGATCAGCTCAAGCGTATTGGTGATGAGTTTTACAAGAGTGACGGCGATCATCATTCCTCGCCTATTGCACCGTTTCCTTCACTCGAGGAATTGGTGTTTGATAACATGCCATGCTGGGAGAAGTGGCACGTACCTGACCCAGAAGCTTTTCCTCAGCTTAAGAAACTTCAAATAGAAAGTTGTCCAATGTTAAACGGAGATATGCTTAACAGCATATTCTGGAGAAGGGATTCTTCCTTGCGGGAAGATGAAGAAGGAAAGTCTGATGAGATGGTAGGTGGTGGGGATGCTTTATCAATAAGGCCATCTCAATCATTTAATGCAAGGAGCATCGACTATCTATGTATTTCAGGGTGTCCGTCTATTGTATCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATTTGGAGATAAAAGGGTGTAGGAATCTGGAATCAGTGTCAGAGGCACCACACGCTGCTCTTCAACGTCTCTCCATTACTTCCTGCCAGAAATTAGTGTCATTTGCAGGAGGAGTGGCTGCACCCAACTTGACTCATCTCAGCCTCACACAATGCTACAATTTGAAGGCATTACCACGTGACATGAAGAGTCTACTCCCAAGTTTACACTCTCTCGAGATATATGGTAGCCCAAACATTTGCAGGTTGCCAGAGGGTGGTTTGCCGCCTAACTTGAAATCACTTAAAGTGGGATATTGCGAGCAACAAGTGAGGAATCTATCATGGATGCGCAACTTCCACACCCTCACTCGTCTTACCATTGATGGTAATTGCTGCCACAACATAAAGTCATACCCAGAGGTAGGTTCGCTGCCTCAGCTTCCCTCCCTTACCACTCTTGAGATAACAAACTTCGATGATCTGGAAACATTTGAGTGCAACGAGCTTCTCCACCTCACCTCCCTTCAACAACTATACATTTCATTCTGCTACAATCTGAAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCGACTTCAAGTTGATTTTTGTGGTTTGCTGGGAGGATTATGCAAGAACAAGCATCAACTAATCTGGCCCAAAATTTCCCACATCCCCAACATTCAAGTCGATTGGAAACAAATTTTCTAA 3498 0.4137 MASAVVGRAFLSGFIKIIVNKSLREDVVNGVLGKKLGSDLLERLKISLLAAEAVLDDAEYKQLGDDSVRDWLNSLRDAVYDADNFLDAVLTKASTKKEVRSLLPSFFLNRHRKMVDNMEGVVSRIEFLVKQKDILGLQKTTKDNNLSSSSSSSWRETTCLMEGNIYGREDDQQALIKTINDKSESQLSVIPIVGMGGVGKTTLAKWVYSVVEGFDLKAWVCISETFDVADITKKTIEEITKNSCTLGSLNLLQNKLQEMLSGKKFFFVLDDVWSENADKWKQFITPFHCGAKGSSILLTTRNQEVASVVQTCPSCTLNELSEESCWLLFAANACFPELNRNPTLEDVGKKIVKRCKGLPLAVETVGRLLRGKDDVKEWNVVLMNDIWELKNSKIIPALLISYFQLPPYLKRSFVYCSLFPKDHKFEKDELILLWMAEDLLRLPKRGESLEEVGSQCFEELASRLFFKPAEYPRDRYVMHDLLHDLAIFLAGDFYCRIEERSEQEKKKVLTRHLSYLSSLSHLSYGRLDHPISKVLSIVKSESLRTSLYIDDLLSMKSRASKLKYLRVLSFRKLNVLPDSIGKLIHLRYLNLSWTKVKTLPESLCNLFNLQTLILYQCSYLTMLPNGMHKLVNLRHLDLRGTYLKEMPRGISKLKHMPILEYFAVGKHEDNGIQELGGLPNLEGSIAIKKLENVVNVRQARSARMLEKNHIDNLSLEWSSGNKMVSNTETLRDILHCLQPHNGLNMLRISGYKGERFPDWVGHCSYNNITWVTLASCKNCCMLPSLGQLPSLGYLRIEGFDQLKRIGDEFYKSDGDHHSSPIAPFPSLEELVFDNMPCWEKWHVPDPEAFPQLKKLQIESCPMLNGDMLNSIFWRRDSSLREDEEGKSDEMVGGGDALSIRPSQSFNARSIDYLCISGCPSIVSLSLDVFPNLKNLEIKGCRNLESVSEAPHAALQRLSITSCQKLVSFAGGVAAPNLTHLSLTQCYNLKALPRDMKSLLPSLHSLEIYGSPNICRLPEGGLPPNLKSLKVGYCEQQVRNLSWMRNFHTLTRLTIDGNCCHNIKSYPEVGSLPQLPSLTTLEITNFDDLETFECNELLHLTSLQQLYISFCYNLKNMEGEKLPPSLLRLQVDFCGLLGGLCKNKHQLIWPKISHIPNIQVDWKQIF* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0050 1165 PRINTS Disease resistance protein signature 927 943 - -
Ahy2g0050 1165 PRINTS Disease resistance protein signature 189 204 - -
Ahy2g0050 1165 PRINTS Disease resistance protein signature 259 273 - -
Ahy2g0050 1165 PRINTS Disease resistance protein signature 355 369 - -
Ahy2g0050 1165 Coils Coil 41 61 - -
Ahy2g0050 1165 Pfam Rx N-terminal domain 39 98 IPR041118 -
Ahy2g0050 1165 SUPERFAMILY RNI-like 903 1139 - -
Ahy2g0050 1165 Gene3D - 401 487 IPR036388 -
Ahy2g0050 1165 Gene3D - 29 131 - -
Ahy2g0050 1165 SUPERFAMILY L domain-like 477 870 - -
Ahy2g0050 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 416 IPR027417 -
Ahy2g0050 1165 Gene3D Ribonuclease Inhibitor 974 1147 IPR032675 -
Ahy2g0050 1165 Gene3D Ribonuclease Inhibitor 894 973 IPR032675 -
Ahy2g0050 1165 SMART LRR_typ_2 630 653 IPR003591 -
Ahy2g0050 1165 SMART LRR_typ_2 583 606 IPR003591 -
Ahy2g0050 1165 PANTHER OS05G0414200 PROTEIN 37 967 - -
Ahy2g0050 1165 Gene3D Ribonuclease Inhibitor 535 873 IPR032675 -
Ahy2g0050 1165 Pfam NB-ARC domain 169 382 IPR002182 GO:0043531
Ahy2g0050 1165 Gene3D - 319 400 IPR042197 -
Ahy2g0050 1165 Gene3D - 150 314 IPR027417 -
Ahy2g0050 1165 PANTHER DISEASE RESISTANCE PROTEIN RP 37 967 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0050 Ahy-Chr2 535799 541422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0050 176 419 WRKY Transcription Factor Family AT5G45050 26.400 2.45e-11 66.6