LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy2g0026	ATGGCTGTGGTGAGTCCTATGAGTCCTGCTATGGCTACAACTCCACACCAGGTCTATCCCACGACGCCTCTTCGTGGAAGCGAGGTTCCATGGATCATGAGTGGCATGAGAGAAGCTGCAGAGGCATCTAGTCCAAATGTGGTTGATGACATTATCCATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAGGTTGAATCTGATTTGGGCAATACAAAATTCTGGAGGAAAGAGGATTTGCATCCTTTATGTTCATGTGCCAGCAGCTACAATCCCCATAATGGGTGCTAATTTTCCAGAAAGTGCAGCCGGAGAGCATCGAGTTCAAGAACATCGAGAAAATGAAGAGCAAGGCATGCGTAATATTCTGAATGACTATCTTCTTATCTGCCAAAAAATGGGGGTTAAGGCAAACAAACTGCATATTATTGACAAGGATTGCATTGAGAAAGGGATTGTAGAACTCATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTGATAAGTACTATTCTAGGAGAATGACAGATCTCAGGTCTAGGAAAGCCATTTATGTGAGAGAAAATGCTCCTGCTTATTGTCATATACAGTTCATCTGCAAAGGATACCTTATACACACAAGGAATCTCAGTTTGGATGGAGGTAATGTAGAGGTCAGGTCTCCTTTGTCACCTCAAACGCCTAGCCGTTCGCCTTCACTTGGACAACAATTATATCGCCGAGTAAGATCTGTTAACGAAAGAAATGGAGGGAAAATGTCACTTGCTTCTCCAATCAGGTTTCTCATGCAACCAAACAGGTTTGGTAGAGAAGGAACTTCTAATGGCTCAGATGTACTGTCTAGGCCAGCAAGTCCTTTGGTTTCATCAACAAGTTCTGTTAATTTCATTAGTGAGCTAAGTGAGAATGCATCAGCCTTGAATTCGAGTAGTCCTAAAGCGATTCAAGCATCTTCTAGCAGGCTGGATGGTGAAATGGATGAGACTCTCTATGATCAACTCCAACAGGCCATGGCTGAAGCTGAGAATGCAAGGCAGGATGCTTATCAAGAGAGTATTAGGCGTGGGAATGCTGAAAGGAATGCCATTGAAGCGATTCGCAGGGCTAAAGCAGCTGAAATGAAGTATGAAGAGGAGGTGAAATTGAGGAAAGAATTAGAGGAAGCAATAAAAAGAGAAAAGGAAGAAATAGATTGCATGAAAAGCCAAAGAGAGAAGCTTAATGAAGAACTCCAGCATGCCTTGCACAAGAATTCATTGCTAGAAAGTAAAATGGCATCAACTCAACTTATGCTAGAGGAGTTAGATCAGAAGAACAAATCTGCTATGGACACATTAGAAAAGTACAAGCAAGAGCGCGAGGATTTGCAAACGCAGCGCGATAATGCCTTAAAAGAAGCTGAGGACTTGAGGAGAGAAAAACAAGAAGAGGCCTCAACCTCACATGTATTTCAACTCTTCTCAGAATTTTCTTTTGCTGAGATTAAAGAAGCTACCAATAACTTCAGTCCATCCCAAAAGATTGGAGAAGGCGGATATGGAAGTATATATAAAGGTATCCTTCGCCAAACCGAGGTAGCTGTGAAAATGTTGAGCCCAGACAGCAAGCAAGGACCTAAAGAGTATCAACAGGAGGTTGAGGTACTAAGCAAGTTAAGGCATTCCAATCTGATCACACTAATAGGAACCTGCCCAGAATCTTGGACTCTTGTCTATGAGTATTTATCCAATGGAAGCCTAGAAGATCGTCTCAGCTGCGAAGATAACACGCCTCCATTATCATGGCAAACTAGAACTCGCATTGCTGCAGAAGTGTGCTCTACTCTAGTGTGTCTCCATTCTAATAAACCTCACAGCATAGTTCATGGTGATTTAAAACCAGCCAACATTCTCCTTGATGCTAACCTTGTTAGCAAGCTAAGTGACTTTGGAATCTCAAGATTACTATCGTGTCGCGAGGATTCTACAACACAGTTCTGGATAACTGATCCAAAGGGAACTTTTGCATATATGGACCCTGAATTCTTCGCTTCAGGGGAACTTACACCAAAGTCTGATGTTTATTCTTTTGGAATCATATTACTAAAACTATTGACTGGTAGACCAGCTGTGGGAATAGCAAAGGTAGTTGAATCTGCTTTAGTTGCTGGAAAGTTGAATTCTCTCTTGGATCCCTTGGCCGGAGACTGGCCATTAGTACTGGCTGAAAAGCTTGCTCGCTTGGCTTTGAGGTGTTGCGAAATGGAGCGAAAGAACCGGCCGGATCTTCATCTGGAAGTATGGAGAATACTTGAACCTATGAAGGCTTCTTTGAGTGGAGAAAACAGATTAGGACTTGGTTCTCAAGAGCTTTGCCAACCCCCTCCTTATTTCATTTGTCCAATTTTCAAGGAAGTCATGAGAGATCCTCACATGGCAGCAGATGGTCATACTTATGAAGCCGAGGCCATACGAGGATGGCTGGACAGCGGCCGCGACACTTCGCCGGTGACAAATTCTAAGCTTGTAATGCACAATCTTGTTCCTAACCATGCTCTCCGCCATGCAATTCAAGACTGGCTTGAAAGCTGA	2580	0.4314	MAVVSPMSPAMATTPHQVYPTTPLRGSEVPWIMSGMREAAEASSPNVVDDIIHVAVAKDVKDSRLNLIWAIQNSGGKRICILYVHVPAATIPIMGANFPESAAGEHRVQEHRENEEQGMRNILNDYLLICQKMGVKANKLHIIDKDCIEKGIVELICKHNIKKLVMGAASDKYYSRRMTDLRSRKAIYVRENAPAYCHIQFICKGYLIHTRNLSLDGGNVEVRSPLSPQTPSRSPSLGQQLYRRVRSVNERNGGKMSLASPIRFLMQPNRFGREGTSNGSDVLSRPASPLVSSTSSVNFISELSENASALNSSSPKAIQASSSRLDGEMDETLYDQLQQAMAEAENARQDAYQESIRRGNAERNAIEAIRRAKAAEMKYEEEVKLRKELEEAIKREKEEIDCMKSQREKLNEELQHALHKNSLLESKMASTQLMLEELDQKNKSAMDTLEKYKQEREDLQTQRDNALKEAEDLRREKQEEASTSHVFQLFSEFSFAEIKEATNNFSPSQKIGEGGYGSIYKGILRQTEVAVKMLSPDSKQGPKEYQQEVEVLSKLRHSNLITLIGTCPESWTLVYEYLSNGSLEDRLSCEDNTPPLSWQTRTRIAAEVCSTLVCLHSNKPHSIVHGDLKPANILLDANLVSKLSDFGISRLLSCREDSTTQFWITDPKGTFAYMDPEFFASGELTPKSDVYSFGIILLKLLTGRPAVGIAKVVESALVAGKLNSLLDPLAGDWPLVLAEKLARLALRCCEMERKNRPDLHLEVWRILEPMKASLSGENRLGLGSQELCQPPPYFICPIFKEVMRDPHMAADGHTYEAEAIRGWLDSGRDTSPVTNSKLVMHNLVPNHALRHAIQDWLES*	860

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy2g0026	859	MobiDBLite	consensus disorder prediction	455	479	-	-
Ahy2g0026	859	SUPERFAMILY	Protein kinase-like (PK-like)	482	759	IPR011009	-
Ahy2g0026	859	PANTHER	U-BOX KINASE FAMILY PROTEIN	39	858	-	-
Ahy2g0026	859	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	789	859	IPR013083	-
Ahy2g0026	859	ProSitePatterns	Protein kinases ATP-binding region signature.	511	532	IPR017441	GO:0005524
Ahy2g0026	859	SMART	serkin_6	505	771	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Ahy2g0026	859	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	623	635	IPR008271	GO:0004672\|GO:0006468
Ahy2g0026	859	SMART	Ubox_2	793	856	IPR003613	GO:0004842\|GO:0016567
Ahy2g0026	859	Coils	Coil	330	354	-	-
Ahy2g0026	859	Pfam	Protein kinase domain	507	758	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy2g0026	Ahy-Chr2	270304	275287	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy2g0026	47	858	U-box Gene Family	AT2G45910	54.167	0.0	847

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Ahy2g0026		Pkinase	1.60E-42	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy2g0026	-		-	adu:107472426	1634

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy12g0064	12	1622643	1627216	Ahy2g0026	2	270304	275287	hybridization

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