Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3362 ATGTTTCCGAAGGAGAATAGTAGTAACGGCTACCATAACCCGCCGCCGCCGCCGCCGCCGCCGGGAGTGGGTAACATTAACAGCCACAGAGAGCGAGCCCGTCGAGGCACGCGCAGGTCACGTGCTTCCCGAGACAGTATCAGCCTTAGGGTTTATGACCAGCAGCAGCAGCAGCAGCAGCGAGCTCCTTGCACGGACTTCGACATGGCCTATTTCCATTCTTACGCTCACCTCGGTATTCACGAAGAGATGATAAAGGATCGCGTGAGGACTGAAACTTATAGAGAAGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTAGTTGACGTGGGATGTGGTACAGGAATCCTTGCAATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTATATGCAGTTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTGAAAGCAAATAATCTGTCTGATGTTATTGTTGTATTGCATGGAAGGGTTGAGGATGTTGAAATCAATGAACAGGTGGATGTTATTATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTCATTACTGCTAGAGATCGCTGGCTCAAACCTGGGGGTCTTATCCTTCCTTCAAATGCAACGTTGTACATGGCTCCTGTCACACATTGTGACAGATACAGTGGAAGCATTGATTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAACCTTCTGTGGAGACAATTACCGGTGAAAATATTTTGACATGGCCACATGTGGTGAAATATATTGATTGTTATTCTGTTACCATTGGTGAGCTAGAAACTGTAACAACAAGATTTAAGTTCAATTCAATGATGCGAGCACCACTTCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGCAATGCCACAAAGCAATTATCCTTCATCAACTTCATTTACTGATAATCATCTGGTGAATGGTAGTCAGAGGAAAAAGCGGATAAATCCAAATGAAGCATTGGTCCTATCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACGTTGATATACTTTTATGATCCGATAGAATTGGAACAAGATCAAGTAATTGAAGGTCTAGTGACATTGACACAAAGCAAAGAGAATGCTCGCTTTATGAATATTCACCTTGAGTATACTTCGGGAGGTCGATCACACATCAAAGAGTCTGTAATGAGATGA 1260 0.4389 MFPKENSSNGYHNPPPPPPPPGVGNINSHRERARRGTRRSRASRDSISLRVYDQQQQQQQRAPCTDFDMAYFHSYAHLGIHEEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILAIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEINEQVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHCDRYSGSIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVKYIDCYSVTIGELETVTTRFKFNSMMRAPLHGFAFWFDVEFNGPAMPQSNYPSSTSFTDNHLVNGSQRKKRINPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGGRSHIKESVMR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3362 419 PANTHER BNAC03G41340D PROTEIN 21 416 - -
Ahy20g3362 419 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 68 419 IPR025799 GO:0016274|GO:0018216
Ahy20g3362 419 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 416 IPR025799 GO:0016274|GO:0018216
Ahy20g3362 419 Pfam Ribosomal protein L11 methyltransferase (PrmA) 106 180 - -
Ahy20g3362 419 CDD AdoMet_MTases 110 209 - -
Ahy20g3362 419 MobiDBLite consensus disorder prediction 47 61 - -
Ahy20g3362 419 Gene3D Vaccinia Virus protein VP39 65 210 IPR029063 -
Ahy20g3362 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 409 IPR029063 -
Ahy20g3362 419 Gene3D - 212 418 - -
Ahy20g3362 419 MobiDBLite consensus disorder prediction 10 24 - -
Ahy20g3362 419 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3362 Ahy-Chr20 143906019 143918224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3362 71 419 C2H2 Transcription Factor Family AT3G12270 37.363 9.43e-67 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3362 K11437 - gmx:100809174 699.508