Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3350 ATGACGATTGTGAGCACCGCACCTAAGACTGAGAGAAAGAAGTCAAGGAAGAACAAGGCAATAGTTAATGAGAACGCTCCCTTGTTGCCTAAGACTCAAGAGAGTGATGCTGGTTTTGATGATTTCAATGGAGCTTCATTCTCGGGAGCAGTTTTCAACTTGTCAACAACAATCATTGGTGCTGGGATCATGGCCTTGCCTGCAACCTTGAGGGAGTTGGGGATGTTGCCTGGCCTCGCCTTCATAGTCTTCATGGCTTTGTTGACTGAGAAGTCAATTGAGTTCTTGATCAGGTTCACCAGGGCAGGAAAAGCTGTTTCCTATGGTGGCCTCATGGGGGATTCATTTGGGAAATATGGGAAAGCACTTGTGCAGCTATGTGTCATAATCAATAACATTGGTGTGCTCATTGTTTACATGATCATAATTGGTGATGTGCTGTCTGGAACATCTGCAAGTGGAGAACATCATTCTGGCATCCTAGAAGGATGGTTTGGTGCACACTGGTGGACCGGGAGGACATTTATCGTCCTGTTTACAACACTGGCTATATTTCTTCCACTGGCAAGCTTCAAGCGAATTGATTCCTTGAGATTCACATCTGCACTCTCAGTTGCACTGGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAGTTGTCAAGGTTATTAGCGGGGGCATTGCAATGCCAAAACTCTTCCCAGACATTCCCGATGTGACATCGTTCTTTAATCTATTCACTGTGGTTCCTGTGTTTGTGACTGCATATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCCTCACAGATGCAAGGGGTTGTACGCACTGCCCTTGGTCTATGCTCTTCCGTGTACTTATTGATAAGCTTCTTCGGGTATCTTCTATTTGGCGAAGGAACTCTTGATGACGTGCTTGCCAATTTTGATACCGACCTTGGAATCCCTTTCAGTTCCGTCCTCAATGATGCTGTCCGTTTGAGCTACGCTGCACACCTCATGCTTGTATTTCCAGTTGTTTTCTATCCGCTGCGGCTCAACATAGATGGTCTCCTCTTCCCTTCATCAAGGCCCTTGGTTCTGGATAACTTCAGATTTGCAACAGTCACTGTTGGCCTAACTGGTGTGATCTTCCTTGGCGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACCGGAGCAACTGCTGCTGTCTGTCTAGGATTCATATTCCCGGCTGCCATTACTCTTAGGGACAGGTACAACATAGCGACCAAGACAGATAAGATTCTATCTGTGCTGATGATAGTCCTTGCAGTCTTCTCAAACATCGTGGCCATATACAGTGATGCCTATGCATTGATCAAGCAGAACAAGGGTTCTCGCGCGTAA 1392 0.4576 MTIVSTAPKTERKKSRKNKAIVNENAPLLPKTQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLRELGMLPGLAFIVFMALLTEKSIEFLIRFTRAGKAVSYGGLMGDSFGKYGKALVQLCVIINNIGVLIVYMIIIGDVLSGTSASGEHHSGILEGWFGAHWWTGRTFIVLFTTLAIFLPLASFKRIDSLRFTSALSVALAVVFLVIAVGISVVKVISGGIAMPKLFPDIPDVTSFFNLFTVVPVFVTAYICHYNVHSIDNELEDSSQMQGVVRTALGLCSSVYLLISFFGYLLFGEGTLDDVLANFDTDLGIPFSSVLNDAVRLSYAAHLMLVFPVVFYPLRLNIDGLLFPSSRPLVLDNFRFATVTVGLTGVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPAAITLRDRYNIATKTDKILSVLMIVLAVFSNIVAIYSDAYALIKQNKGSRA* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3350 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
Ahy20g3350 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 458 - -
Ahy20g3350 463 MobiDBLite consensus disorder prediction 1 25 - -
Ahy20g3350 463 PANTHER AMINO ACID TRANSPORTER 7 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3350 Ahy-Chr20 143777736 143781317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3350 1 458 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.281 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3350 K14207 - gmx:100796345 779.245