Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3342 ATGGACGCAGTGATGAGTTCCGTACTCCTGTTCCTGTTAACGGTAACCGTCGTCCATCTCTTTGGTCGTTCCCTTTCCACCAAACCATCAAAACACAAGCTTCCACCAGCACCCAAGGGCATCCCCATCTTCGGAAACCTCCTTCAGCTCGGCAATAAGCCACACCAAACTCTCGCCACTCTCGCCACCATCCACGGCCCAATCATGCGCCTCCAGCTAGGCCAAGTAACCACCGTCGTCATGTCCTCCGCCGAAACAGCCAAGTCAGCCCTCCAAATCCACGACCAGCACCTTTCGAACCGGAAGATGCCAGATGCAATGAAAGGCGCCGGCCACGACGCTTACAGCCTCCCGTTTATTCCGGTTTCGCCACGCTGGCGAGACTTGAGAAAGACATGCAACAACTTGATCTTCTCCAACAAGAACCTGGACGCCAGCCAAGAGCTGAGGCAAAGAAAGATAAGACAACTTTTGGCGGACGTTCAAGACAGCAGCTCCAGAGGCCAAGTAGTGGATATTGGTAGGCTCGCTTTCATGACCACAATCAACTTGTTGTCCAACACCTTCTACTCTCAGGACCTTGTTAGGTCGTCCGACGTGGCGGGGGAGTTCAAGCAGCTGGTGACCAACATAATGAAAGAGGTTGGGAGGCCCAACGTGGCGGATTGTTTTCCGCTGCTGAAGGCGGTGGACCCCCAGGGCATAAGGAGGAGGACGGGCAATTACTTTGGCAGGCTGCTGGAAATCTTTAAAGGGTTGGTTCGTGAGAGGTTGCGCCTCCGGAGTGACGGTGGTTACTGTCCCAGGAATGATGTATTGGATCTCATGCTCCACAATGACAATGCTCAAGACATGTATAAGGACAAGATTGAGCGTCTCTCGCTGGACTTGTTTCTGGCTGGAACAGACACAATAACATCTACAGTGGAATGGGCGATGGCAGAGTTACTGCACAATCCAAAGGTGATGTCAAAGGCGAAGTCAGAACTAGAGGAAATAGTTGGAAAAGGTAAGGTAGTGGAAGAATCAGACATGGCAAGACTGCCGTACTTGCAGGCAGTAATAAAAGAAACACTCCGAAAGCACCCGGCAGTTCCCCTGCTGCTCCCTCGCCAAGCAGAAATGGATGTTGAGATCCAGGGATACACGGTGCCAAAGGGGGCACAAGTTCTTGTTAACGTCTGGGCTATTGGAAGGGATCCAAACGTGTGGGAAAATCCGCATGTGTTCTCGCCTGAGCGCTTCTTAGGATCCCAGATCGACTTCAGAGGCCGCAATTTCGAGCTCACGCCGTTTGGTGCTGGAAGAAGGATATGCCCCGGTTTGCCGTTGGCCATGAGGATGTTGTTCTTGATGTTGGGTTTGTTTATCAACTGTTTTGATTGGAAGCTTGAAGCTGAGGATATGGACATGGATGAAAAGTTTGGTCTTACTTTGGAGAAGGCTCAACCTGTGCGTGTTATTCCCCTCCATATAGCTGCTTAG 1485 0.5145 MDAVMSSVLLFLLTVTVVHLFGRSLSTKPSKHKLPPAPKGIPIFGNLLQLGNKPHQTLATLATIHGPIMRLQLGQVTTVVMSSAETAKSALQIHDQHLSNRKMPDAMKGAGHDAYSLPFIPVSPRWRDLRKTCNNLIFSNKNLDASQELRQRKIRQLLADVQDSSSRGQVVDIGRLAFMTTINLLSNTFYSQDLVRSSDVAGEFKQLVTNIMKEVGRPNVADCFPLLKAVDPQGIRRRTGNYFGRLLEIFKGLVRERLRLRSDGGYCPRNDVLDLMLHNDNAQDMYKDKIERLSLDLFLAGTDTITSTVEWAMAELLHNPKVMSKAKSELEEIVGKGKVVEESDMARLPYLQAVIKETLRKHPAVPLLLPRQAEMDVEIQGYTVPKGAQVLVNVWAIGRDPNVWENPHVFSPERFLGSQIDFRGRNFELTPFGAGRRICPGLPLAMRMLFLMLGLFINCFDWKLEAEDMDMDEKFGLTLEKAQPVRVIPLHIAA* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3342 494 SUPERFAMILY Cytochrome P450 30 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 492 - -
Ahy20g3342 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Ahy20g3342 494 Pfam Cytochrome P450 35 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 Gene3D Cytochrome P450 22 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 492 - -
Ahy20g3342 494 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy20g3342 494 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3342 Ahy-Chr20 143715544 143717660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3342 4 490 Cytochrome P450 AT2G45550 45.726 1.31e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3342 - - lja:Lj2g3v0039250.1 627.476