Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3339 ATGAATATGATGAGTTCAATAACCACCAAGGAGGAGTACGATGATGCTTTCACCAAAGCTGCTTCCTTCGCATTTGCTCAGGTGTTTCCTGCAATCTTGAACGCTGCTGTTGATATGAACTTGTTTGATATCATATCAAAGTCAGAGAGTCCATTAGGCATGTCAGCTTCTGAGATTGCATCTAAGATTCCAAAGCAACACAGTGAAATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCGTTCTCTTCTGACTTGCTCCATTCGCACCATTAATGAAGATGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGACAATACTATACAAGTAGTCATCATGATGAACAAGGAGGCTCCTGGATTGCAATGTCAACTGTAAGCTACCAAGGTTACCGTCATCTTTGGACAGATACAAAAGATGCAATATTGGATGCTAACAATCACAATCATTTCCAAAAAATGTACGGAAAGATGGCATTTGAATATATGGAGACAGACACAGAGTTAGGTAACCTTTTCGGACAAGCAATGGCACAAGCTGGGTCTTTAGGATTGAAACAACTTCTTAATGCATATAAAGGCTTTGAGGGAATATCAACTTTAGTTGATGTTGGAGGTGGATATGGACAAACTTTGAAACAAATTCTCTTGCAATATCCATCAATTAAAGCAATTAATTTTGATTTGCCTCATGTTGTTAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGAGGAGACATGTTTAAAAGTGTTCCAAAAGCTGATGCCATTTTACTCAAGCATGTATGTCATAACTGGGAAGATGAAGAATGTGTCAAGTTTTTAAGAAACTGCTATGAAGCTTTGCCACCACATGGGAAGGTCATAGTTTTGGATGCTTTATTGCCAGAAATTCCAAAATCAACATCGTTTAAGGATACACAGGCTGTGGATCTCGATTTTCTTATGTTTCTAGTTCACGGTGGAAAGGAAAGAACCCAAAAACAATTTGAGAAATTATGCAAGACCTCAGGATTTTCACGATTTCAGGTTGCTTGCAATGATTCCTCAAATGTCGTTGCAGTCATGGAGCTTTACAAATAA 1104 0.394 MNMMSSITTKEEYDDAFTKAASFAFAQVFPAILNAAVDMNLFDIISKSESPLGMSASEIASKIPKQHSEMGSRLERMLPSLVARSLLTCSIRTINEDGDTERVYAVSPVGQYYTSSHHDEQGGSWIAMSTVSYQGYRHLWTDTKDAILDANNHNHFQKMYGKMAFEYMETDTELGNLFGQAMAQAGSLGLKQLLNAYKGFEGISTLVDVGGGYGQTLKQILLQYPSIKAINFDLPHVVKNAPPHPGIEHIGGDMFKSVPKADAILLKHVCHNWEDEECVKFLRNCYEALPPHGKVIVLDALLPEIPKSTSFKDTQAVDLDFLMFLVHGGKERTQKQFEKLCKTSGFSRFQVACNDSSNVVAVMELYK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3339 367 SUPERFAMILY "Winged helix" DNA-binding domain 11 116 IPR036390 -
Ahy20g3339 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 367 IPR016461 GO:0008168
Ahy20g3339 367 CDD AdoMet_MTases 205 297 - -
Ahy20g3339 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 19 367 - -
Ahy20g3339 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Ahy20g3339 367 Pfam O-methyltransferase domain 140 347 IPR001077 GO:0008171
Ahy20g3339 367 PANTHER O-METHYLTRANSFERASE 19 367 IPR016461 GO:0008168
Ahy20g3339 367 Gene3D Vaccinia Virus protein VP39 175 354 IPR029063 -
Ahy20g3339 367 Pfam Dimerisation domain 32 81 IPR012967 GO:0046983
Ahy20g3339 367 Gene3D - 28 193 IPR036388 -
Ahy20g3339 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3339 Ahy-Chr20 143674019 143676341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3339 14 367 Monolignol Biosynthesis Gene Families AT5G54160 47.339 3.23e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3339 - - aip:107621172 437.573