Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3337 ATGATGAGTTCCACCACCAATAATAATAATAATTCCAAGGAGGATTACGATGATGCTTTCACCAAAGCTGCTTCATTCGCATTTGCTCAGGTGTTTCCTGCAATCTTGAACGCTGCTGTTGATATGAACTTGTTTGATATCATATCAAAGGCAGAGAGTTCGTTAGGCATGTCAGCTTCTGAGATTGCATCTAAGATTCCAAAGCAACACAGTGAGATGGGTAGCAGACTTGAACGCATGCTGCCATCATTGGTGGCTCGTTCTCTTCTGACTTGCTCCATTCGCACCATTAATGAAGATGGTGACACTGAAAGAGTTTATGCAGTTTCTCCTGTTGGACAATACTATACAAGTAATCATCACGATGAACAAGGAGGCTCCTGTATTGCATTGTCAACTTTATTCTATCGAGGATATCGTCATGTTTGGAAAGATACGAAAGATGCAATATTGGATGCTAACAATCACAACCATTTCCAAAGAATGTATGGAAAGATGGCATTTGAATATATGGAAACAGACAGAGAGTTATGTAACCTTTTCGGAGAAGCAATGTCTCAAGTAGGGCCTTTAGGAGTGAAATCAATCCTTGATGCATATAAAGGTGGCTTTGATGGAATATCAACGTTAGTTGATGTAGGAGGTGGATATGGACAAGTCCTCAAACAAATTCTCTTCCAATATCCATCAATTCAAAAAGCAATTAATTTTGATTTGCCTCATGTTGTGAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGGGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATTTTGATCAAGCATGTATGTCATAACTGGGGAGATGAAGAATGTGTCAAGTTTTTGAGAAAGTGCCACGAAGCTTTGCCAGCGGATGGGAAGGTTATAGTTTTGGAAATTTTGGTGCCAGAAATTCCCAAGTCGACATCAAAGGATATTTGTGCTGTGGACATGGATTACAGTATGTTTCTAGTTCATGGTGGAAAGGAAAGAACCGAGAAACAATATGAGAAATTATGCAAGAGGTCAGGATTTTCCAGATTTAAGGTTGCTTGCAATGATTCAAGTGCCATTGATGCAGTGATGGAGTTTTACAAATAA 1116 0.3978 MMSSTTNNNNNSKEDYDDAFTKAASFAFAQVFPAILNAAVDMNLFDIISKAESSLGMSASEIASKIPKQHSEMGSRLERMLPSLVARSLLTCSIRTINEDGDTERVYAVSPVGQYYTSNHHDEQGGSCIALSTLFYRGYRHVWKDTKDAILDANNHNHFQRMYGKMAFEYMETDRELCNLFGEAMSQVGPLGVKSILDAYKGGFDGISTLVDVGGGYGQVLKQILFQYPSIQKAINFDLPHVVKNAPPHPGIEHIGGDMFESVPKGDAILIKHVCHNWGDEECVKFLRKCHEALPADGKVIVLEILVPEIPKSTSKDICAVDMDYSMFLVHGGKERTEKQYEKLCKRSGFSRFKVACNDSSAIDAVMEFYK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3337 371 Gene3D Vaccinia Virus protein VP39 178 358 IPR029063 -
Ahy20g3337 371 PANTHER O-METHYLTRANSFERASE 11 371 IPR016461 GO:0008168
Ahy20g3337 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 371 IPR016461 GO:0008168
Ahy20g3337 371 CDD AdoMet_MTases 209 302 - -
Ahy20g3337 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 358 IPR029063 -
Ahy20g3337 371 PIRSF O-mtase 1 371 IPR016461 GO:0008168
Ahy20g3337 371 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Ahy20g3337 371 Pfam O-methyltransferase domain 143 351 IPR001077 GO:0008171
Ahy20g3337 371 SUPERFAMILY "Winged helix" DNA-binding domain 15 120 IPR036390 -
Ahy20g3337 371 Gene3D - 31 196 IPR036388 -
Ahy20g3337 371 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3337 Ahy-Chr20 143648342 143669463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3337 17 358 Monolignol Biosynthesis Gene Families AT5G54160 47.262 1.86e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3337 - - aip:107621172 429.098