Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3327 ATGGCTCATCATCATCACCCTAAATTATTAGCTTCTTCTTTTCTCATCCTCTTTACTTTCTCTTCTCTTTCAACATTTTCACATGCACACTTTCTTCTAGAAGAACTTCATTTCAACAATGAGAGGCTTAAGAATGCCTATGTTGCTCTCCAAGCATGGAAACAAGCTATCTACTCTGATCCTTACAACACAACCGCTAATTGGGTTGGCAGCGATGTTTGCTCCTACAATGGCGTCTTCTGCGCTCCCGCTCTCGACGATCCCTCCCTCGACGTCGTCGCCGGCATCGACCTTAATCATGCTGACATTGCCGGACACCTTCCCGGAGAGTTAGGCCTCTTGACCGACTTGGCGCTTTTCCACATCAATTCCAACAGGTTTTGCGGAATCGTACCTCCATGCATGGAGAATCTAACCCTCATGCACGAATTTGACATAAGTAACAACCGATTCGTTGGTGGATTTCCCAACGTGGTTCTCAAATGGTCAGACATGAAGTATCTGGATCTTAGATACAACGATTTCGAAGGGTCTTTGCCGCCGCAACTGTTCGAGATGGATCTGGATGCAATCTTCTTGAACAATAACCGTTTCACCTCTGTTCTCCCTGCCACTCTCGGCAAATCCAAGGCTTCGGTTATTACTTTCGCTAACAACAAGTTCACAGGCTGCATTCCGAAATCGATTGGAAAGTTGAACAAGTTGAATGAGATTCTCTTCATGGGGAACAAACTGGGTGGTTGCTTCCCTCAAGAGATTGGAATGATGGAGGATTTGAATGTTTTGGATCTTAGCGACAACAATTTTGTAGGTACTCTGCCTAACATGACGGGTTTGCAGAACGTGGAGGTTATAGACATTGCAAGGAATGAGCTTAGCGGTTATGTGTCTGATTCTGTTTGTCAATTACCTTCTCTGAAGAACTTCACTTACTCTGATAATTACTTCAACGGGGAAGCTCCAGCTTGTGCTGTTGCTGTTGCTGCTTATAAGGGTTCAATTAGTACAACTGTTTTTGATGACTCAGGAAATTGTTTGACTGGAAGGAAGAATCAAAAGAAAACTAGGGTGTGTTTGCCGGTACTAACTCGGCCTGTAGATTGTAGCAAGGCTTGTGGTGACGGAGAAGGAGGTGGTAATAATAATAATAATAAGGCCCCCTCGTTAACACCGAAAAAGTCACCTCCAAAGCCAAAGGTTAGTAAACCACATTCACCACCACCACCATCACCACCACCACCAGTTAGTTCTCCTCCTCCTCCTCCATCCCCTGTTTACTCACCACCACCACCACCTACATACTCTCCTCCTCCTCCTCCACCAGTGCACTCTCCACCGCCACCAACTCAATCACCTCCCCCACCACCACCAGTTTACTCTCCCCCACCTCCAACTATGTCACCTCCTCCTCCTCCACCAGTTTTCTCTCCACCACCACCACCAACTCAATCACCTCCTCCACCCCCTGTTTACTCTCCACCACCACCAACTCAGTCCCCTCCTCCTCCTCCACCAGTTTACTCCCCACCACCACCAACTCAGTCACCACCACCTCCACCCCCGGTTTACTCACCGCCGCCACCAACTCAGTCACCTCCTCCTCCACCCCCAGTGTTCTCTCCACCACCACCAACTCGGTCACCACCACCTCCCCCAGTTTACTCGCCACCACCACCAACTTACTCACCTCCTCCTCCAACCCCAATATACTCACCACCACCACCAACTAAGTCACCTCCTCCACCCCCAGTTTACTCGCCACCACCACCAGCATGGGATGATGATGTCGTCCTCCCACAACACTTTGGATCTGCATACAGGTCACCTCCTCCACCGGCTATTATTGGATACTAA 1854 0.4871 MAHHHHPKLLASSFLILFTFSSLSTFSHAHFLLEELHFNNERLKNAYVALQAWKQAIYSDPYNTTANWVGSDVCSYNGVFCAPALDDPSLDVVAGIDLNHADIAGHLPGELGLLTDLALFHINSNRFCGIVPPCMENLTLMHEFDISNNRFVGGFPNVVLKWSDMKYLDLRYNDFEGSLPPQLFEMDLDAIFLNNNRFTSVLPATLGKSKASVITFANNKFTGCIPKSIGKLNKLNEILFMGNKLGGCFPQEIGMMEDLNVLDLSDNNFVGTLPNMTGLQNVEVIDIARNELSGYVSDSVCQLPSLKNFTYSDNYFNGEAPACAVAVAAYKGSISTTVFDDSGNCLTGRKNQKKTRVCLPVLTRPVDCSKACGDGEGGGNNNNNKAPSLTPKKSPPKPKVSKPHSPPPPSPPPPVSSPPPPPSPVYSPPPPPTYSPPPPPPVHSPPPPTQSPPPPPPVYSPPPPTMSPPPPPPVFSPPPPPTQSPPPPPVYSPPPPTQSPPPPPPVYSPPPPTQSPPPPPPVYSPPPPTQSPPPPPPVFSPPPPTRSPPPPPVYSPPPPTYSPPPPTPIYSPPPPTKSPPPPPVYSPPPPAWDDDVVLPQHFGSAYRSPPPPAIIGY* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3327 617 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 14 591 - -
Ahy20g3327 617 PRINTS Proline rich extensin signature 436 457 - -
Ahy20g3327 617 PRINTS Proline rich extensin signature 421 433 - -
Ahy20g3327 617 PRINTS Proline rich extensin signature 400 416 - -
Ahy20g3327 617 PRINTS Proline rich extensin signature 385 397 - -
Ahy20g3327 617 MobiDBLite consensus disorder prediction 370 617 - -
Ahy20g3327 617 Gene3D Ribonuclease Inhibitor 45 341 IPR032675 -
Ahy20g3327 617 Pfam Leucine rich repeat N-terminal domain 47 81 IPR013210 -
Ahy20g3327 617 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 591 - -
Ahy20g3327 617 MobiDBLite consensus disorder prediction 391 594 - -
Ahy20g3327 617 MobiDBLite consensus disorder prediction 376 390 - -
Ahy20g3327 617 SUPERFAMILY L domain-like 47 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3327 Ahy-Chr20 143605890 143607896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3327 38 473 Trihelix Transcription Factor Family AT4G33970 56.335 1.32e-160 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3327 - - aip:107621173 748.429