Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3310 ATGGGAACAGAAGAATCCGATAAACTTGGTGCATCTTTGAAATTTATGGAGCCTAAAGATGAAACTGTAAACAGGTCTTTGCAGCCACATTGGACTAGTTCTATGCAGGCATATCATAATGCTGGTTCTACTCCAATTCCCTTCTTAAACCCGCATTATGGTCCTTACTTTGGCCAATTCATTTGGCCGAAACAGTCAACCATCACTCAATATAATTTTTTGCACGAGTCCATGAGGATTTCTAATAATTCTGCTATAGCTGGAGTGATTCCAAATCAGCAGCAACAACCAAGTGCTGTCCCAGTAGTTGGGCCTGCTGGGGATGCTGCATCAGTTTTTTCTGAAAAAATACAAAGGATGTTTGGTGCAAATAACGAGGATTCAATTAAAAAATGTAATGGAAGCTTACAATCTAAAAGCTCAATCACTAAGGAAGCAAAAGAAATTAAGATCAGTTGCTCAACTCCAAACCATGACATGAGTGGAGCAAGTGGAGGCAAAGAACCTTCAGATGAAGGCCATGACAGTAAACATGATTTCCCTTCACCAAAGCAGAAATGCAATGTGGTGTCTGAAAATGTAAATTCAAGAAAACAACACAAGGATACAATGGCTGGTCTGAATGCTTCTGCCAGTGTTGCTAAACTTGCAAAACTGGAAAATGATGAAATCAGGAAAGAAAGAAAAAGATTATCTAATCGCGAATCAGCCAAGAGATCAAGGTTAAGAAAACAGAAAGAATGCGAAGAGCTACGTGGAAACATGGACAATTTAAAGGATGAAAATTCCTCACTCACACACATGCTTATAAGGCTTTCAGAGGAATGTATGGATCTCAGCAATGAAAACGATTCTATCCAGGCTGAACTGGTTAAGATGTATGGAGCAGAATCAATAGCAGATCTATTGCCCATGAAGCCTTCTTGA 927 0.3937 MGTEESDKLGASLKFMEPKDETVNRSLQPHWTSSMQAYHNAGSTPIPFLNPHYGPYFGQFIWPKQSTITQYNFLHESMRISNNSAIAGVIPNQQQQPSAVPVVGPAGDAASVFSEKIQRMFGANNEDSIKKCNGSLQSKSSITKEAKEIKISCSTPNHDMSGASGGKEPSDEGHDSKHDFPSPKQKCNVVSENVNSRKQHKDTMAGLNASASVAKLAKLENDEIRKERKRLSNRESAKRSRLRKQKECEELRGNMDNLKDENSSLTHMLIRLSEECMDLSNENDSIQAELVKMYGAESIADLLPMKPS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3310 308 MobiDBLite consensus disorder prediction 151 187 - -
Ahy20g3310 308 CDD bZIP_plant_GBF1 226 277 IPR045314 GO:0003700|GO:0006355
Ahy20g3310 308 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 228 243 IPR004827 GO:0003700|GO:0006355
Ahy20g3310 308 SMART brlzneu 221 285 IPR004827 GO:0003700|GO:0006355
Ahy20g3310 308 PANTHER BZIP TRANSCRIPTION FACTOR 1 307 - -
Ahy20g3310 308 Pfam bZIP transcription factor 223 283 IPR004827 GO:0003700|GO:0006355
Ahy20g3310 308 SUPERFAMILY Leucine zipper domain 224 280 IPR046347 GO:0003700|GO:0006355
Ahy20g3310 308 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 223 286 IPR004827 GO:0003700|GO:0006355
Ahy20g3310 308 MobiDBLite consensus disorder prediction 168 182 - -
Ahy20g3310 308 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 307 IPR044827 GO:0003700|GO:0006355|GO:0043565
Ahy20g3310 308 Gene3D - 223 281 - -
Ahy20g3310 308 Coils Coil 214 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3310 Ahy-Chr20 143465063 143470236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3310 1 302 bZIP Transcription Factor Family AT4G36730 29.730 4.97e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy20g3310 bZIP_1 3.10E-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3310 K09060 - gmx:102665715 254.603