Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3269 ATGATCCGTTTCTTTAAGATTGTTCTCAGAAAAAACCTTGATGATGAATATCTATTCAGTAGGAAATATGGTGGTGATATGCAAAATCCAGTGCAACTCCAACCTCCAGATGGCACTGAATGGAGAATAGATTGGACTAATCATGATGGTGAGATTCTGTTTGAAAACGGTTGGAAAGAGTTTGCTACATTTTACACTTTGGAGAATGGTCATTCTAACATCAAAGTACACATATTCGACATGAGTGCCCTCGAAATTGATTATCCTTCCAATGGCCGAATCGGTGATGACAACTCGATGAACCGCCAGCGCGAAGGGGCCGAGGCCGGCCAAAGAAAACAGTGA 345 0.4203 MIRFFKIVLRKNLDDEYLFSRKYGGDMQNPVQLQPPDGTEWRIDWTNHDGEILFENGWKEFATFYTLENGHSNIKVHIFDMSALEIDYPSNGRIGDDNSMNRQREGAEAGQRKQ* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3269 114 Gene3D - 2 83 IPR015300 -
Ahy20g3269 114 PANTHER B3 DOMAIN-CONTAINING 2 99 - -
Ahy20g3269 114 MobiDBLite consensus disorder prediction 92 114 - -
Ahy20g3269 114 SUPERFAMILY DNA-binding pseudobarrel domain 4 89 IPR015300 -
Ahy20g3269 114 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 99 - -
Ahy20g3269 114 MobiDBLite consensus disorder prediction 98 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3269 Ahy-Chr20 143157143 143157796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3269 3 92 B3 DNA Binding Superfamily AT4G01580 31.731 9.89e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3269 - - ahf:112786616 244.202