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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ahy20g3259
ATGACTGAGGAAGATCAAGCCACACCACCACCCATGAATAATTCCAATGCAGTCCTTTTCTTCAAGATCATACTTTCAACAGCTCTTGAGGATGGAAAACTTAAGATCCCAAACAGTTTCACTAAAAAATATGGTGATGGCCTTTCAAACCCAGTGTTTCTTAAGCCTCCGGATGGAACCGAATGGAAAGTAGAATGGACTAAGCAAGATGATGGGATTTTTCTTGAACATGGTTGGAATGAGTTTGCTATGTATTACTCTCTAGATCATGGGCATTTGCTGTTTTTTGAGTACAAAAACACTTCTCAATTTGAGGTACAAATATGTGAAGTGAGTGGCCTTGAAATAGATTATCCTTTCCATGTCATTCAACAAGAAAATGAAAACATTGAACAGATCAATCATGAGGCAGATCAAGTGTTCGATGATATGCCTCAAAGCCAAAACAATAGAATGAAATCACCAATGTCTTATCCTCAACCATCAAACACAACTAGAGAAGTTAGAACAAGCTGCAGTTTGCAAAACTTGCCTCTTATTCACCAAATTAATGGTAATGAGTGTCAAGGAACAAGCTTTGACGAGTCAACATTTGCATCTATTAAGAAAGAATTGGATGAGGATATAGGTGGTAGCACTCCATGTCCAAGAGTGGAACGGTTAAAGCAAACCTTAAACAAAGCTACAACTTCCAAATCTAGACAAAACCCCTCTTTCATGGTTATCATGAAACCTTCCTATGCTAAAAGTTACTCGATGAATATCCCTTCAAAATTCACAGCAAAATATTTGAAGAAGCAAGCGACAGCCATCCTTGAGGTCCATGATGGGGGGAGAACATGGGCTGTTACTTACAGTTTTGGCAAATTCAGTTCTGGATGGAAGAGATTTGCAAAAGACAATAGTTTGAATGTAGGGGACATTTGTGTTTTTGAGCTCACCAATCCCAAAGACCTTTATTTTAAGGTATCCATAACTCGAATTGAAGAAGAGGAACTTCCGCTATCACAAGTTGAAGGAGACAGAGTCAATTGTTTAGAACCAGCAAAAGTCAATTATGTTGAAAGCAAAAGTGACATTATGATTAAAGTCAAAAAGGAAACACAAGAAACTTCATTGGCGACTCCTCCCGGCTTTGAGCCAAATGAAGAAGCCCTGAAAGAAGCTAAGAAATTCACCTCAGAAAATCCATTTTTCATGGTCATTATAAAGCCGAGCTTTCTGAGGCAACGCAGACCGAGTATACCAGCTTTCTTCATCAGAAATCACCTCAAAAAGACTCATATTGTGACATTCAAGTTTGGAGAGACACGGTGGCGTATAAAGTTGCTGCGTTACACAAGATACAGAAGTCCAATCACATTATCGAATGGTTGGAGCCTATTTTGTAGAGGAAGTAGATTGAAAGCAGGAGATGTTTGCATCTTTGAGCTAATCAACAAAGAAGATGCAGTGTTTGATGTTCACTTGTTTAGGTGCCACTCCTAG
1488
0.3884
MTEEDQATPPPMNNSNAVLFFKIILSTALEDGKLKIPNSFTKKYGDGLSNPVFLKPPDGTEWKVEWTKQDDGIFLEHGWNEFAMYYSLDHGHLLFFEYKNTSQFEVQICEVSGLEIDYPFHVIQQENENIEQINHEADQVFDDMPQSQNNRMKSPMSYPQPSNTTREVRTSCSLQNLPLIHQINGNECQGTSFDESTFASIKKELDEDIGGSTPCPRVERLKQTLNKATTSKSRQNPSFMVIMKPSYAKSYSMNIPSKFTAKYLKKQATAILEVHDGGRTWAVTYSFGKFSSGWKRFAKDNSLNVGDICVFELTNPKDLYFKVSITRIEEEELPLSQVEGDRVNCLEPAKVNYVESKSDIMIKVKKETQETSLATPPGFEPNEEALKEAKKFTSENPFFMVIIKPSFLRQRRPSIPAFFIRNHLKKTHIVTFKFGETRWRIKLLRYTRYRSPITLSNGWSLFCRGSRLKAGDVCIFELINKEDAVFDVHLFRCHS*
496
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ahy20g3259
495
Gene3D
-
380
494
IPR015300
-
Ahy20g3259
495
Gene3D
-
218
330
IPR015300
-
Ahy20g3259
495
SUPERFAMILY
DNA-binding pseudobarrel domain
14
111
IPR015300
-
Ahy20g3259
495
Pfam
B3 DNA binding domain
239
325
IPR003340
GO:0003677
Ahy20g3259
495
Pfam
B3 DNA binding domain
398
492
IPR003340
GO:0003677
Ahy20g3259
495
Pfam
B3 DNA binding domain
21
110
IPR003340
GO:0003677
Ahy20g3259
495
PANTHER
B3 DOMAIN-CONTAINING
11
327
-
-
Ahy20g3259
495
PANTHER
B3 DOMAIN-CONTAINING
365
493
-
-
Ahy20g3259
495
Gene3D
-
12
113
IPR015300
-
Ahy20g3259
495
SMART
B3_2
239
329
IPR003340
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ahy20g3259
Ahy-Chr20
143044342
143047844
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ahy20g3259
380
494
B3 DNA Binding Superfamily
AT3G18990
34.188
1.02e-11
64.7
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Ahy20g3259
B3
2.50E-12
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ahy20g3259
-
-
adu:107471690
991.49
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