Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3256 ATGGGGAGACCGAAAAATCCCATCTGGAATCAAGTTACTATAATAGCAGAGAGTGAGAAGGAGAGGAAGTGGTTGTGCAATCGCTGTCGCAAGCAATATGCAGGAGGCGCTACAAGAATTAATGAGCATCTGGGAATTACAAAAGGGAAGGGGAATATCACTTTATGTCCTCGTCGTCACGACCTTCTTGCTAATGAAGGAGTAAACAATTCTATGTTGCCTGGTTCAAGTAATCAAATGGAAGCTCCAAATGAATTTGGTTTAAACAATGGTGTGTTGCCTGCTTCAAGTAATCAATTGGAAGATTCAAATGGATTGGATTCATTAACAGGGTTTGAACTTGCGGATCCTATGAATTCCTACCATGAAAAGGCTGAAGGTCATCGTAATATGATATCTGCTTGCTTTGACGGTCCAATAGATCAAAATGATGTGGCCGGACCCAGCAATATGGTGGAAGGTTTGCCACATTCAGATGAGGTTCTGGAAGGTGGTAGCAGTGGTTTTGAAACTGACATTGAAGATGAGGTTCTGGAAAGTGGTAGCAGTGGTTTTGAAACTGACATTGAAGATGAGGTTCTGGAAGAACTACGTGAATTGGTTGATGAATTAACCGGCTGGGAAGAAGAAGTTAAAGAAGAACTGCAGTGGCTGGAGTATTGTGGTAAGAAGAAGCGTGAAAGGGAAGAAGCCGATGATTGGTTAAAGAAAGCGGAAGACTTTAAAAAAGAAGCTCGTGGCATAATTGACTCGTTCCCTCGGGATGCTTTGCAAGACCTTCAAATGAAAACAGATAACTTACGCTGCAGATTGAACTTGCTGGAGAATGCGACACCTGTCTGCTGTGATGATGATATTCATATGGACGCATATTTCACAAAGATGCGAAAACTTCTAAGGAATGACAATGTCTTCTTCATCAGTGTATGTGGAATGGGAGGAGTGGGAAAAACGTGGCTAGTAACTCACTTTAGGAATCAAATAAGACGGAATAAGAGTTTTAATTTTGAGAATGTATTTTGGGTCACAGTATCCCAAGATTTTAGCATTCTTAAATTGCAAAACTCCATTGCCAAAAGGATAGGTGAAAAGCTTGATGATGATGATGAGATAACCGACAGGGCAGAAATTCTGTCATCTGCACTGGAAAAGATAGATAGATCAGTGCTTATCTTGGATGATGTTTGGAATTATATTGATCTGCAGAAGATAGGAATTCCGCTCAGAATAAATGGGATCAAATTGATTCTAACAAGTCGTCTGAAACATGTGTTCAGACAAATGGATTGCCCGACAAGTAATGTAATAGAAATGGAACCTTTATCGGTGGAAGAACAAGAATGGGAATTATTTTTGCTAAACCTAGGATGTGATGGAAGGCCTGCAAGCCTTTCCGGTGAAGTGGAAAATACTGTAAAATCTGTTGTAAAGATGTGTGAGGGCTTGCCACTTGGAATTACCGTGATGGCAAGATTGATGAAAGGGGTAAATGATGACATCAATATATGGAAACATGCACTAAGCAAACTTGAAGATTCATCAATGGGAGAAGACATGGAAGAAGAGGTTATAAAGGTATTAAAACGAAGCTATGACCAGCTGGCAGACAAGACTATTCAAAATTGTTTCTTGCAACATGCATTATACAGTGAGGTTTCAGATGAGGTGTTTATTATGAATCTCGTTGATGAAGGGTTAATACAATCAACGAGTAGTTTGGAAAAAATATTTGTCCAGGGGAAAGCAATAGTAGCTAAACTCAATAGCCATTCATTGATAGATTGTTTGTGGGATCCTGATTCCAGTGATTTGCATATGCATGGCTTATTGAGGGAGATGGCAAGTCATATTATGAAGGGAAGGTTCATGCTGAGATGTAGGAAAAGGTTAGATAATATCCCTGAGATGCAGGAGTGGACACCACAGTTGGAGAAAGTTTCATTGATGGGCAATTGTATAGAAGAAATTCCAGAGGGCATATCACCAGAGTGTCCGCAGTTGTCCACCTTGAATTTTAGTATCAATATGATTAGATATATTCCAGATTGTTTTTTCTACCGCATTAAAGCTCTGACTCTACTTGATTTATCCCACAATGAAGAGTTAACATCCTTGCCGAATTCGTTGTCTAGTTTGAGGTGCCTTAAATCATTGTTGCTCAAAGGTTGTCGCTCGTTGGAATCTGTGCCTCCATTGGGGAACCTGCAGGAGCTTTCAAGATTGGTTATTTCAGGGACATCAATTAAGGAAGTACCTGATGGGTTGGAGGTACTGACCAAGTTGAGATGGCTTGATCTATCTCAAAATAGAAAACTCGTGTGTGTAGAATGGTCTGTGATATTTGGTTTGACTAACGTGCAATACCTTAATCTCGAGAAAACATCTATAACAGGAGAAGTAGGAATTGTGCATGGCATGATGAGTAGGTTGGAATATTTTGTAGGCTCTTTTCAGGTAGCTAAGCACTTGGCTGATTTTGTGGAAAATATCCTCAACAGAGATGGTGGACTCAAATGTTATCATATCGGTTTCCGAGCTTGGGATTTGTTTTGGGAACCTGACTTTACTGGGAGGAAAAGGAAGCTCATAACTGTGGAGGATTTCGAAGGATTTGAATTTTTGCTGCCAAGTGACCTTGACCAATTGGTTATAAGAAATATTGAACAGTGGAGCGGAGACTTATGTGGAGCTTTCTCATTCAAAGCTCCTTCTTCACTGAGGGAGATAATAGTGTGGCGTTGGCCAAAATTGGAGAGATTGTGTTGTATGTCTGGTGACTGTTCCTTCTGCCAACATCTCCAAAACCTTCAATCTTTGGAGCTATATAAATTGGAAAGACTAGACGCCATCTGGAGTGAAGAAGACGAATTCATAGGTTTGCCCAACTTGAGTCAATTGAAGATCTCGTATTGTGATAGGATAGAAAGGTTGATGGGAGCTGCGGCACTTGCAAAATTCCCAAAACTAGAGAGTATAGAAGTGGATAGTTGTCTGTCAATGAAAGAGGTATTTGCAACGGGGATGAGCGAGGATGATCCTGATCTCACAATTACGTTCCCCAACTCATTCAAGCGGTTGCATTTATCGGAGCTGCCAGAATTGGTGAGTGTGTGCGACAGCATTATAGTCTCTGAATCCCCTCCAGACGTTACGGCCTGCTTCTGTCGACAACTAAGACAGTCCCACTTTCGGCACAAGCAATCTCCTTCAGCTTCTGAGTCTAATATTAAAATACGAAATTGA 3243 0.4073 MGRPKNPIWNQVTIIAESEKERKWLCNRCRKQYAGGATRINEHLGITKGKGNITLCPRRHDLLANEGVNNSMLPGSSNQMEAPNEFGLNNGVLPASSNQLEDSNGLDSLTGFELADPMNSYHEKAEGHRNMISACFDGPIDQNDVAGPSNMVEGLPHSDEVLEGGSSGFETDIEDEVLESGSSGFETDIEDEVLEELRELVDELTGWEEEVKEELQWLEYCGKKKREREEADDWLKKAEDFKKEARGIIDSFPRDALQDLQMKTDNLRCRLNLLENATPVCCDDDIHMDAYFTKMRKLLRNDNVFFISVCGMGGVGKTWLVTHFRNQIRRNKSFNFENVFWVTVSQDFSILKLQNSIAKRIGEKLDDDDEITDRAEILSSALEKIDRSVLILDDVWNYIDLQKIGIPLRINGIKLILTSRLKHVFRQMDCPTSNVIEMEPLSVEEQEWELFLLNLGCDGRPASLSGEVENTVKSVVKMCEGLPLGITVMARLMKGVNDDINIWKHALSKLEDSSMGEDMEEEVIKVLKRSYDQLADKTIQNCFLQHALYSEVSDEVFIMNLVDEGLIQSTSSLEKIFVQGKAIVAKLNSHSLIDCLWDPDSSDLHMHGLLREMASHIMKGRFMLRCRKRLDNIPEMQEWTPQLEKVSLMGNCIEEIPEGISPECPQLSTLNFSINMIRYIPDCFFYRIKALTLLDLSHNEELTSLPNSLSSLRCLKSLLLKGCRSLESVPPLGNLQELSRLVISGTSIKEVPDGLEVLTKLRWLDLSQNRKLVCVEWSVIFGLTNVQYLNLEKTSITGEVGIVHGMMSRLEYFVGSFQVAKHLADFVENILNRDGGLKCYHIGFRAWDLFWEPDFTGRKRKLITVEDFEGFEFLLPSDLDQLVIRNIEQWSGDLCGAFSFKAPSSLREIIVWRWPKLERLCCMSGDCSFCQHLQNLQSLELYKLERLDAIWSEEDEFIGLPNLSQLKISYCDRIERLMGAAALAKFPKLESIEVDSCLSMKEVFATGMSEDDPDLTITFPNSFKRLHLSELPELVSVCDSIIVSESPPDVTACFCRQLRQSHFRHKQSPSASESNIKIRN* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3256 1080 Pfam Leucine rich repeat 737 795 IPR001611 GO:0005515
Ahy20g3256 1080 Pfam Leucine rich repeat 665 724 IPR001611 GO:0005515
Ahy20g3256 1080 PANTHER - 227 1049 - -
Ahy20g3256 1080 Gene3D - 443 535 IPR042197 -
Ahy20g3256 1080 Gene3D - 269 437 IPR027417 -
Ahy20g3256 1080 PRINTS Disease resistance protein signature 382 396 - -
Ahy20g3256 1080 PRINTS Disease resistance protein signature 479 493 - -
Ahy20g3256 1080 PRINTS Disease resistance protein signature 756 772 - -
Ahy20g3256 1080 PRINTS Disease resistance protein signature 306 321 - -
Ahy20g3256 1080 SUPERFAMILY L domain-like 606 1035 - -
Ahy20g3256 1080 Gene3D Ribonuclease Inhibitor 868 1063 IPR032675 -
Ahy20g3256 1080 Pfam NB-ARC domain 296 532 IPR002182 GO:0043531
Ahy20g3256 1080 Coils Coil 224 244 - -
Ahy20g3256 1080 PANTHER DISEASE RESISTANCE PROTEIN RP 227 1049 IPR044974 GO:0006952
Ahy20g3256 1080 Coils Coil 190 214 - -
Ahy20g3256 1080 Coils Coil 257 277 - -
Ahy20g3256 1080 Gene3D Ribonuclease Inhibitor 622 825 IPR032675 -
Ahy20g3256 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 544 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3256 Ahy-Chr20 143029488 143034048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3256 200 791 WRKY Transcription Factor Family AT4G12020 22.779 1.44e-08 57.4