Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3253 ATGTGTGAGGGCTTGCCACTTGGAATCAATGTGATGGCAAGATTGATGAAAGGGATAAATGATGACATTAATATCTGGAAATATACACAGAGCAAACTTGAAGATTCATCAATGGGAGAAGACATGGAAAAAGAGGTTATAAAGGTATTAAAACGAAGCTATGACCACCTGGCAGACAAGACTATTCAAAACTGTTTCTTGCAACATGCATTATACAGTGATGTTTCACCTGAGGTGTTTATTATGAATCTCGTTGATGAAGGGTTAATACAATCAACGAGTAGTTTGGAAAAAATATTTGTCCAAGGGGAAGCAATATTAGCCAAACTCAGTAGCCATTCATTGATATCTCGGAAGCTTCCAACGGAATTCACAAACAAATATGGATTGAAACTCCCAAATCCGGTGATTCTGAAAGTTGTAAATGGCAACCAAAAGAAAGTGCATTGGACCAATATTAATGGTTCCATTTGGTTTATTGGGAAGGAATGGAAAGAGTTTCTTGAGCACTACTCTGTCTCCCATGGCCACCTTTTATTGTTCAAATATTGTCTTGATGCTTCATATTTTAGGGTCCAAATATTTTATAACACTACTCTTGAAATTGATTACCCTTCTCCTGAACTCAATTATGCTGATTATGATGATGATGATTTTGATTTTGATGATGATGGTGATGGTGATGGGGATGGTGATGATGATGTTATGAAGGTTCACTATGATCAATATCAATTCAAAGAGAAAAATAAGGGTATTGCTGATGCTATAAAGAGTAGAGACAGACAAGAGAGACAAGATGGCAACCCCAATTTTGAGGTTGTCATGAGGGATTCATATATTAATGGAGGAAGATGCATGGTAAGTAATTAA 870 0.3632 MCEGLPLGINVMARLMKGINDDINIWKYTQSKLEDSSMGEDMEKEVIKVLKRSYDHLADKTIQNCFLQHALYSDVSPEVFIMNLVDEGLIQSTSSLEKIFVQGEAILAKLSSHSLISRKLPTEFTNKYGLKLPNPVILKVVNGNQKKVHWTNINGSIWFIGKEWKEFLEHYSVSHGHLLLFKYCLDASYFRVQIFYNTTLEIDYPSPELNYADYDDDDFDFDDDGDGDGDGDDDVMKVHYDQYQFKEKNKGIADAIKSRDRQERQDGNPNFEVVMRDSYINGGRCMVSN* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3253 289 CDD B3_DNA 110 195 IPR003340 GO:0003677
Ahy20g3253 289 Gene3D - 100 199 IPR015300 -
Ahy20g3253 289 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 115 250 - -
Ahy20g3253 289 SMART B3_2 106 198 IPR003340 GO:0003677
Ahy20g3253 289 Gene3D - 1 58 IPR042197 -
Ahy20g3253 289 PANTHER B3 DOMAIN-CONTAINING 115 250 - -
Ahy20g3253 289 SUPERFAMILY DNA-binding pseudobarrel domain 113 205 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3253 Ahy-Chr20 143013029 143014728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3253 83 205 B3 DNA Binding Superfamily AT1G49475 34.109 1.63e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3253 - - aip:110268509 465.307