Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3245 ATGTCAGAATCAAACGCACTAGCAAATGGCTTGGCCGGTGCTGGTGGCGGTATCATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAACACGCGTCAGCAAACTGAGAGAACACTGAAGAGGAACAAGCAGAGTTTGCTTCTTCAGTCCTCCAATACAACCACTACTTCTGCTCCTGGCACTCTTCTTCAGATCCTTCATGTAATTGGAAGTGAGGGTTGGGGTGGACTCTACAGTGGCCTTAAGCCTTCTCTGCTTGGAACTGCTGCTTCACAGGGAATATACTATTATTTCTATCAGATTTTCAAGAACAAGGCAGTGGCTATTGCAGCTGCTAGAAAACTTAAAGGCCATGGAGATGGTACTGTTGGAATGTTTGGTTGGCTTGTTGTTGCTGCTATTGCTGGGTCCTTGAATGTGCTGCTAACAAACCCAATATGGGTTCTTGTGACTCGTATGCAGACACATACTCAAGCAGAAAGAAAAATCATGGAGGAAAAGAAAGAGGCCTTGAGGATGGCAGCTTCTGAAAGCAGCTTAGCAGGCTCAATATTACGAGAGAAATTGGCTGAACTTGATTCTAAGAAACCGCGGCCATATGGAACTATACATGCAGCTAATGAAGTGTATAGCGAAGCTGGTATTGTTGGATTTTGGAAGGGTGTCATCCCTGCACTTATTATGGTCTGCAATCCATCAATACAGTTTATGATTTATGAGAGCTCATTAAAGCGTCTAAGGGCGCGATCGTCTAAGAAGCAGGGTAATGTAACTGCATTGGAGGTCTTTCTCCTTGGAGCATTAGCAAAACTTGGAGCAACCGTTTCAACATATCCCTTACTGGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGCTAGTAACTCATTAAGATACTCAGGTACCTTTGATGCAATACTGAAAATGATCCGTTATGAAGGATTGCCTGGTTTTTATAAAGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCAGCTTCTGTTCTATTCATGATTAAGGAGGAGCTTGTTAAGGTTTTCATTTCATTGGCAGATAAGAGCAAAAAAGTTGTATCAAATTTAAGGAATTAA 1101 0.4214 MSESNALANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLLLQSSNTTTTSAPGTLLQILHVIGSEGWGGLYSGLKPSLLGTAASQGIYYYFYQIFKNKAVAIAAARKLKGHGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEALRMAASESSLAGSILREKLAELDSKKPRPYGTIHAANEVYSEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKRLRARSSKKQGNVTALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGASNSLRYSGTFDAILKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMIKEELVKVFISLADKSKKVVSNLRN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3245 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 106 IPR018108 -
Ahy20g3245 366 Pfam Mitochondrial carrier protein 124 247 IPR018108 -
Ahy20g3245 366 Pfam Mitochondrial carrier protein 4 105 IPR018108 -
Ahy20g3245 366 Pfam Mitochondrial carrier protein 258 350 IPR018108 -
Ahy20g3245 366 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 357 - -
Ahy20g3245 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 349 IPR018108 -
Ahy20g3245 366 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 357 IPR044712 GO:0006862|GO:0055085
Ahy20g3245 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 246 IPR018108 -
Ahy20g3245 366 SUPERFAMILY Mitochondrial carrier 5 345 IPR023395 -
Ahy20g3245 366 Gene3D Mitochondrial carrier domain 47 362 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3245 Ahy-Chr20 142940201 142943172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3245 209 364 Chloroplast and Mitochondria Gene Families AT2G47490 26.582 7.71e-06 45.4