Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3212 ATGATGGGCACCTTGCTCCAACTCTACCCTTTTCTCTTCCTATTCCTATTCCTTCCAATCCTAAACACAGTTTTATCACAACCCCAACAACTCTTTTATTCTGGATTCAATCATATTCCTGGAACCAACTTATCCCTGACTGGAATAGCGAAAATTGATGACAAAAATGGAATCTTGAAGCTCACAAACGAAACAAGTAGATTAATTGGGCATGCCTTTTACCCAATCCCATTTCAGTTCAAGAATAACAATGGCAGCAGAACCTTCTCATTCTCTTCATCATTTGCAATTGCCATTGTTCCTGAGTATCCAAAGCTTGGTGGCCATGGCTTGGCTTTCACCATTTCAGCTTCCATGGATACTCTCAAGCATGCACTTCCAAGCCAGTATCTTGGCCTACTCAACTCAACCAACATTGGAAACTTCTCCAACCACCTTTTCGCCGTCGAATTCGACACTGTCCAGGACTTCGAATTCGGCGACATAAATGATAACCATGTTGGTATAAACATCAACAACTTGGTTTCCAATGTTTCTTGTAATGCAAGTTACTATGCCGAAGGCGAAGGCGAAGGAAGACTTGAAAATCTAAACCTTAAGGGTGGTAAACCAATCATGGTTTGGGTTGATTATGATTCTGTTAAGAGTGTGATAAGTGTTACACTCTCTCCTTCTTCTACAAAACCAAAGAAACCAACTTTGTCATATTCATTGGATCTCTCACCAATCTTTCATGAGAGAATGTATGTTGGATTCTCTGCTTCAACCGGTTTGCTTGCAAGCTCCCATTATGTCTTGGGTTGGAGCTTCAAGATCAATGGAACTGCTCCAACACTTGATCTCGATTCGCTTCCAAAGCTTCCGGGTCCCAAGAAGAAGCAAACTCCCATGGTTGTTGGGGTTTCAGTTGCTACTTCATTCATTGCTCTGTTTTCTCTGTTTCTTGGATTTTACTTGTTCTGGAAAATCAAGAATGCTGATGTTATAGAGCCATGGGAGCATGAGATTGGGCCTCACAGGTACTCTATGATTCATAAAGTCTATACTCATATAAAGAGCTCAAAACAAGGTCTTAGAGAATTTGTGTCAGAAATCGCCAGCATCGGCCGGCTTCGCCACCGGAACTTGGTCCAATTGCTTGGCTGGTGCCGCCGCCGTGGCGACCTCCTACTTGTGTATGATTTCATGGAAAATGGTAGCCTAGACAAGTACTTATTCGACGAGCCGAAAACGATCCTAAGATGGCAACAAAGGTTCAAGATCATAAAGGATGTTGCTTCAGCACTTTTATATCTCCATGAAGGATATGAACAAGTGGTGATTCATAGAGATGTTAAAGCTAGTAATGTTCTTTTAGATAGTGAAATGAATGGAAGGCTTGGAGATTTTGGTTTAGCAAGATTGTATGAACATGGTGGTCATCCTAGCACAACAAGGGTGGTTGGAACATTAGGTTATTTGGCACCTGAGTTGCCAAGAACAGGAAAAGCCACTCCTAGCACTGATGTTTATGCATTTGGTGCATTAATGCTTGAAGTGGCATGTGGGGTTAGGCCTGTTGATCCAAGAAAGGCACAACATGAGGATCTGGTTTTGGTGGATTGGGTTTGGAAGATGTACAAAGAAGGGAAGTTAATTGATGTTGTGGACCCAAATTTGAATGGTGATTTTGATGAGAGGGAGGTTGTTATGGTTCTCAAATTAGGCCTAATGTGTTCAAATGGTGCACCAACTTCTAGGCCTAGCATGAGGCAAGTGACTAGGTATTTGGATGGTGAAAATTTGTTGCCTGATTCATTGATGAAGCCTCATCATAATAACCAAGAGGGTTTTGATGAGTTCTTGAATCCATTTGGGTCTTCTTTTAGTAGTTCAGATAATATTGGCATGTATGCTAGTTTTCCTTCATTCACTAATTCCCCTGTTTTTACTCCTATTGGTAGGAGAGAAACAAGCTGA 1959 0.4155 MMGTLLQLYPFLFLFLFLPILNTVLSQPQQLFYSGFNHIPGTNLSLTGIAKIDDKNGILKLTNETSRLIGHAFYPIPFQFKNNNGSRTFSFSSSFAIAIVPEYPKLGGHGLAFTISASMDTLKHALPSQYLGLLNSTNIGNFSNHLFAVEFDTVQDFEFGDINDNHVGININNLVSNVSCNASYYAEGEGEGRLENLNLKGGKPIMVWVDYDSVKSVISVTLSPSSTKPKKPTLSYSLDLSPIFHERMYVGFSASTGLLASSHYVLGWSFKINGTAPTLDLDSLPKLPGPKKKQTPMVVGVSVATSFIALFSLFLGFYLFWKIKNADVIEPWEHEIGPHRYSMIHKVYTHIKSSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMENGSLDKYLFDEPKTILRWQQRFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDSEMNGRLGDFGLARLYEHGGHPSTTRVVGTLGYLAPELPRTGKATPSTDVYAFGALMLEVACGVRPVDPRKAQHEDLVLVDWVWKMYKEGKLIDVVDPNLNGDFDEREVVMVLKLGLMCSNGAPTSRPSMRQVTRYLDGENLLPDSLMKPHHNNQEGFDEFLNPFGSSFSSSDNIGMYASFPSFTNSPVFTPIGRRETS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3212 652 ProSiteProfiles Protein kinase domain profile. 309 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3212 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 292 IPR013320 -
Ahy20g3212 652 CDD lectin_legume_LecRK_Arcelin_ConA 33 274 IPR001220 GO:0030246
Ahy20g3212 652 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 352 614 - -
Ahy20g3212 652 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 13 343 - -
Ahy20g3212 652 SMART serkin_6 341 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3212 652 Gene3D Phosphorylase Kinase; domain 1 342 396 - -
Ahy20g3212 652 Gene3D Transferase(Phosphotransferase) domain 1 397 602 - -
Ahy20g3212 652 SUPERFAMILY Protein kinase-like (PK-like) 345 607 IPR011009 -
Ahy20g3212 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Ahy20g3212 652 PANTHER - 13 343 - -
Ahy20g3212 652 PANTHER - 352 614 - -
Ahy20g3212 652 Pfam Protein kinase domain 350 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3212 652 Gene3D - 30 280 - -
Ahy20g3212 652 Pfam Legume lectin domain 32 284 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3212 Ahy-Chr20 142664499 142666985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3212 24 651 Receptor kinase-like Gene Family AT3G55550 52.827 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy20g3212 Lectin_legB 2.20E-73 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3212 - - aip:107621816 1271.14