Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3207 ATGCAAAACCCAGTGTACCACAGCTACGTGAAGCTGCTCGCATTCGATCTTCTCTCTCTCACCCAAACCCCGTCTTCTTCTTCGGTTTCAGAACCTACGTTCTCTCGCAGAGGCATCCCTCTCTCTCGCGCAGAGACACTTGGGACTGTTACACTCCGTGACCACAAGCCACACAAGTTCCTCCGCTTTCTCATCGACGACGGCACCGCCTCCGTCCCCTGCATCCTCTGGCTCAACCACATGACTTCACCCTACCTTGCTCGCCGCCGCCGCCCCGACGACCTCCGCCTCATTGCAGATTCGTCCGCCAGGTTTGCCGCCGAGGTTAGGGTTGGGGTGGTGGCGAGGGTGAGGGGCAGGATCGGGTGCTACAACGGGAAGGTGCAGCTCACGGTTTCCGATGTTGTGGTTGAAAGGGATCCCAATGCTGAGATACTCCACTGGCTCGACTGTATCAACCTTGCTCGTAACTGCTACAACGTTTTGCCTGGGCCCGGGCCCGGGCCTGGTCCTGGCCCGTCTTCTGCATGCAAGGAGAATCAAGCAGAATGA 552 0.5833 MQNPVYHSYVKLLAFDLLSLTQTPSSSSVSEPTFSRRGIPLSRAETLGTVTLRDHKPHKFLRFLIDDGTASVPCILWLNHMTSPYLARRRRPDDLRLIADSSARFAAEVRVGVVARVRGRIGCYNGKVQLTVSDVVVERDPNAEILHWLDCINLARNCYNVLPGPGPGPGPGPSSACKENQAE* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3207 183 Pfam OB-fold nucleic acid binding domain 48 136 IPR004365 GO:0003676
Ahy20g3207 183 PANTHER CST COMPLEX SUBUNIT STN1 1 162 - -
Ahy20g3207 183 PANTHER REPLICATION PROTEIN A-RELATED 1 162 IPR040260 -
Ahy20g3207 183 Gene3D - 1 162 IPR012340 -
Ahy20g3207 183 SUPERFAMILY Nucleic acid-binding proteins 26 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3207 Ahy-Chr20 142627625 142628532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3207 38 154 Core DNA Replication Machinery Family AT2G24490 27.350 5.77e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3207 K23312 - vvi:100852748 198.749