Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3203 ATGACAGGTTCTTTGAAGGTGTTGAATTCATTGAAGATGTTGCAATTTTTTGTTCGTTGGTGGATTTGTGTGTTTGTGCTGTTAAATTTAGGAGCTATTAATGGTCAGAATTACCGAACTGTTAGAAACAAAATCCTTCCATTCAGCAAAATTGTTGTGGATTCTTTGGGACATGGCAACTTTTTTACAATTCAATCTGCCATTGATTTTGTCCCTTCCAACAATAAGTATTGGGTTTTAATTAATGTGAAGGCTGGTATTTACAGGGAAAAAGTGACGATTCTAAGTGATAAACCATACATAATATTGAAGGGAAGTGGAAAGATGAAAACGTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACCTTCCAATCCAATGCTGATAATATCGTCGTCAAATCTATCTCTTTTAGGAATACATATAACAATCCAATAAATACGAACCCCAGAGTTCCTGCAGTAGCTGCAATGATAAGCGGAGACAAGTCTTACTTTTATAGAGTTGGATTCTTCGGATTGCAAGATACTTTGTGGGATAATCATGGAAAACATTATTATAAACTTTGTACTATTCAAGGTGCCGTTGATTTTATCTTCGGTGCTGGCCAGTCATTGTTTGAGAGGTGTGGCATAAATGTAATTGGAAGGGAATTAGGAGAAGGATTTATAGGATATATAACAGCGCAAGGGAGAGAAAATCCAGGAGATTCAAATGGGTTTGTGTTCAATAATTGTAATGTATTTGGAGATGGTTCTACTTTTTTGGGAAGACCCTGGAGACCTTATGCCAGAGTTCTTTTCTACAATACAAGTATGGCCAACATTATTCAACCCGCTGGTTGGGATCCATGGGATTCCTCTCAACATGAGAATAACATTACGTTTGCAGAGTATGGCAATTTTGGACCAGGTTCTGATACCTCCAAACGAGTTAATTGGATTACAAAATTGGATTTAGAGACGGTTAATATGATGACAAGTACGAGTTTCATAGACTCTGAAGGATGGCTTGATCTCAACCAACGGTTTTAA 1044 0.3755 MTGSLKVLNSLKMLQFFVRWWICVFVLLNLGAINGQNYRTVRNKILPFSKIVVDSLGHGNFFTIQSAIDFVPSNNKYWVLINVKAGIYREKVTILSDKPYIILKGSGKMKTWVEWDDHNTTAQSPTFQSNADNIVVKSISFRNTYNNPINTNPRVPAVAAMISGDKSYFYRVGFFGLQDTLWDNHGKHYYKLCTIQGAVDFIFGAGQSLFERCGINVIGRELGEGFIGYITAQGRENPGDSNGFVFNNCNVFGDGSTFLGRPWRPYARVLFYNTSMANIIQPAGWDPWDSSQHENNITFAEYGNFGPGSDTSKRVNWITKLDLETVNMMTSTSFIDSEGWLDLNQRF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3203 347 SUPERFAMILY Pectin lyase-like 51 343 IPR011050 -
Ahy20g3203 347 Gene3D - 48 346 IPR012334 -
Ahy20g3203 347 ProSitePatterns Pectinesterase signature 2. 195 204 IPR033131 -
Ahy20g3203 347 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 342 - -
Ahy20g3203 347 Pfam Pectinesterase 51 337 IPR000070 GO:0030599|GO:0042545
Ahy20g3203 347 PANTHER PECTINESTERASE 10-RELATED 25 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3203 Ahy-Chr20 142605838 142608181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3203 61 294 Carbohydrate Esterase AT2G19150 46.383 1.01e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3203 - - ahf:112786588 717.998