Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3198 ATGTTGGTGGGAGGTTTAGGAGAAGAAGAAATAGCAAAAGCTCAGTTTCACCAAAGAAATCATGGAGATATCCATAACAAACTCCTTCCTTATTTGACAGTTTCTGTTGACCAATCTGGCCATGCTAACTTCTCTACAATTCAATCTGCAATTGATTCAGTCCCTTCCAACAATAAGCATTGGGTTTTAATCAATGTCAGGGCTGGTATTTACAGGGAAAAGTTGAAGATTCCATATGAGAAGCCATATATAATTTTGAAAGGAGAGGGAAAAAGGAACACTCTTGTTGACTGGGATGACCATGCTACCACCTCACAGAGCCCTACATTCTCAACAATGGCTGACAATGTTGTTGTCAAGTCAATCAGTTTTAGGAATTCATACAATAATCCAAGAAATAGTAATCCAATTGAACCTGCAGTAGCTGTAATGGTAAGTGGAGACAAGTCATATTTCTATGATGTTGGCTTTTTTGGTCTTCAAGACACTTTGTGGGATGATCAAGGAAGACATTACTATAAATTTTGTACTATTGAAGGTGCTGTTGATTTTATTTTTGGTGCTGGTCAGTCTTTATATGAGGGATGTAGCATATCTGTTATTGGAGCGTCCCTAGATCCTGGTTATGTTGGTTTTATCACAGCACAGGGGAGAACAAATTCAAATGATGCAAATGGGTTTGTGTTTAAAAATTGTAAAATATTTGGAAATGGAACCACATTTTTGGGAAGACCATGGAGAGGTTACGCTAGAGTTCTTTTTTATAACACAAGCATGTCTAACGTTATACTACCAACAGGTTGGGATCCATGGAATTTCAATCATCATGAGAATCGCGTAACTTTCGCAGAGTATAAGAATTTTGGACCCGGTTCTAACATTTCATTGCGAGTGAAGTGGAGTAAGAAGCTTAGTTTAGCAACAATTAAATCAATGATTAGCACTAAGTTCATTGACAATGAAGGTTGGCTTAAGGCACAAGACTTCTAA 990 0.3747 MLVGGLGEEEIAKAQFHQRNHGDIHNKLLPYLTVSVDQSGHANFSTIQSAIDSVPSNNKHWVLINVRAGIYREKLKIPYEKPYIILKGEGKRNTLVDWDDHATTSQSPTFSTMADNVVVKSISFRNSYNNPRNSNPIEPAVAVMVSGDKSYFYDVGFFGLQDTLWDDQGRHYYKFCTIEGAVDFIFGAGQSLYEGCSISVIGASLDPGYVGFITAQGRTNSNDANGFVFKNCKIFGNGTTFLGRPWRGYARVLFYNTSMSNVILPTGWDPWNFNHHENRVTFAEYKNFGPGSNISLRVKWSKKLSLATIKSMISTKFIDNEGWLKAQDF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3198 329 Gene3D - 31 329 IPR012334 -
Ahy20g3198 329 SUPERFAMILY Pectin lyase-like 32 326 IPR011050 -
Ahy20g3198 329 Pfam Pectinesterase 34 318 IPR000070 GO:0030599|GO:0042545
Ahy20g3198 329 ProSitePatterns Pectinesterase signature 2. 178 187 IPR033131 -
Ahy20g3198 329 PANTHER PECTINESTERASE 10-RELATED 25 328 - -
Ahy20g3198 329 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3198 Ahy-Chr20 142575082 142579457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3198 33 277 Carbohydrate Esterase AT2G19150 45.935 3.31e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3198 - - ahf:112786588 454.136