Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3195 ATGTCTCTAACCACATTCTCTTCCTCCTCCTCCTTCTTCTTCTTCTTCATCATCAATTTCATCTTCCTCTTCAATCTTCACCCTTCAATTGCACAAAGCCAAAACCAACGAGTAACCTTCTCTTCATTCAACAGCTCAGACTCTCCATGGAGTCCAACTCAGAACAAATTCCTTATCTCACCAAACAGAAACTTCACTGCTGGCTTCTTCCCCCTTCCGAATTCCCCAAACCACTTCACCTTCTCCGTTTCGTTCGCCAAAGTTCCCCAATCTTCAAACCCTATCGTTTGGAACGCCACATCCACCAACCTCACCTCCAAATCTTCGCTTCAAATCACCACCAATAATCAAATCCTCCTCAACGGTCTCCCATTATTTGTTAACCCTAACCGCTCATCTTCTTCCCAATCGAACAACGCATCAACGATTCAACTCGTTCTCACCGACGACGGAAACTTGAAATTCGGAGATTCGAACAGCTTCGATGACGCTACCAACACTATCCTTCCCAATCAAGACGTCAACTCAACCGAGCTTGTATCTAACAACGGGAGATTCAAGTTCGTTAACTCTTCGTTTCTTGTTCTTGCTTCGAACAACGAGCAATACTACACGACGCCGAGTCCGTTCTTGAACATGGATAATTTGGGGATGATGAATATGCAAGGTAACTCGTTCCTCACCTCGGATTACGGTGACAACAGGTTCCGGAAACTGGTGCTCGATGACGATGGGAATCTAAAGATCTATAGCTTCTATCCTGAAGAGAATAATCAGTGGAAGGTTGTGTGGAGAGCGATATGGGAAATGTGCCATGTCAAAGGAAGGTGCGGTTCTTATGCTATTTGCGTAACAAGTGATGGTTTGAACGTGACTACCACTTCTTGTGTTTGCCCCACCGGGTTCGCCGCAAACAACGGTGTTCCCGACCGTGGCTGCACACGGAAGAAACCACTCTCCAAGAACACCGGCTTCATCAGGCTCGATTACGTGAACTACACAGTCTCCGGCGACGGCAGCACCATGAACCAGTTAAGCGGCTCCCAGAATTTCTCTGTCTGCGAAGCCACCTGCAAAACAAACCCCAACTGCTTGGGATTCGGATTCAAGTACGACGGATCAGGTTTCTGCGTTCCGCTAATCGGTAAAGAGCTTCAATACGGTTACTGGTCACCGGGCACCGAGACCGCGTTGTTCATCAAAGTAGATGAATCAGAATCAGAAGAAAGCTCCAATTTCGTTGGGCTGACGGAGGTTATGCAAACGAGTTGCCCGGTGAGGATAAGCCTGCCGCTGCCACCGAAGGACTCGAACGCCACCACGAGGAACATCATCATAATCTGCACGCTATTTGCGGCAGAGCTTATTTCTGGTGTGGCTTTCTTCTGGTCTTTCTTAAAGAGATACATCAAATACAGGGACATGGCCACTACTTTAGGCCTTGAACTCTTACCTGCTGGTGGCCCCAAAAGGTTCACTTACTCTGAGCTCAAGGCCGCAACCAATGATTTTTCCAACCTCATTGGAAGAGGTGGATTTGGGGCGGTTTACCGAGGCGAGTTGCCAGACCACCGCGTCGTCGCTGTCAAAGTCTTGAAAAACGTTTCAGGTGGCGACGCGGAGTTCTGGGCCGAGGTGACCATCATTGCCAGAATGCACCACCTCAATTTGGTTCGACTATGGGGATTCTGTGCGGAGAAAGGACAAAGAATTCTCGTGTACGAGTACATCCCTGGTGGCTCATTGGACAAGTACCTCTTCAGGTTGAACAATTCTAAAAAAGGCGACTCAAATACACAGCAAGAGAAGCCTATTTTGGATTGGAATATGAGGTATAGAATTGCTCTTGGTGTAGCCAGATCTATTGCATATTTGCATGAAGAGTGTTTGGAATGGGTTCTACACTGCGACATCAAACCCGAAAATATTCTTCTAGGCGATGACTTTTGTCCTAAGATATCGGATTTTGGACTCGCTAAGTTAAGGAAAAAAGAGGATATGGTAACAATGTCCAAGAGGAGGGGTACTCCGGGATACATGGCTCCTGAATGGATTACTGCGGATCCAATAACATCAAAGGCTGATGTATATAGTTTCGGAATGGTGTTGTTGGAGCTTGTGAGTGGAGTTAGAAACTTTGAGAGTCCTGAGTCTATGGTTAGAAGTGATGAGTGGTACTTTCCAGGTTGGGCTTTCGATAAGATGTTCAAGGAAATGAGGGTCGAGGACATTCTTGATGGTCATATTAGGGAAATGTATGATACAAGGGCCCATTTTGAAATGGTTAATAGGATGGTGAAGACTGCTATGTGGTGCCTTCAGGATAGGCCTGAGTTGAGGCCTACAATGGGGAAAGTGGCTAAGATGTTGGAAGGAACTGTGGAGATTACTGATCCCAAGAAGCCCACCGTGTTCTTCCTTGGGGAAGAGTAG 2433 0.4686 MSLTTFSSSSSFFFFFIINFIFLFNLHPSIAQSQNQRVTFSSFNSSDSPWSPTQNKFLISPNRNFTAGFFPLPNSPNHFTFSVSFAKVPQSSNPIVWNATSTNLTSKSSLQITTNNQILLNGLPLFVNPNRSSSSQSNNASTIQLVLTDDGNLKFGDSNSFDDATNTILPNQDVNSTELVSNNGRFKFVNSSFLVLASNNEQYYTTPSPFLNMDNLGMMNMQGNSFLTSDYGDNRFRKLVLDDDGNLKIYSFYPEENNQWKVVWRAIWEMCHVKGRCGSYAICVTSDGLNVTTTSCVCPTGFAANNGVPDRGCTRKKPLSKNTGFIRLDYVNYTVSGDGSTMNQLSGSQNFSVCEATCKTNPNCLGFGFKYDGSGFCVPLIGKELQYGYWSPGTETALFIKVDESESEESSNFVGLTEVMQTSCPVRISLPLPPKDSNATTRNIIIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSELKAATNDFSNLIGRGGFGAVYRGELPDHRVVAVKVLKNVSGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRLNNSKKGDSNTQQEKPILDWNMRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSKRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFESPESMVRSDEWYFPGWAFDKMFKEMRVEDILDGHIREMYDTRAHFEMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITDPKKPTVFFLGEE* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3195 810 PIRSF SRK 9 810 IPR024171 GO:0004674
Ahy20g3195 810 Pfam Protein kinase domain 506 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3195 810 SUPERFAMILY Protein kinase-like (PK-like) 484 791 IPR011009 -
Ahy20g3195 810 Pfam S-locus glycoprotein domain 222 305 IPR000858 GO:0048544
Ahy20g3195 810 Gene3D Phosphorylase Kinase; domain 1 476 576 - -
Ahy20g3195 810 CDD STKc_IRAK 508 792 - -
Ahy20g3195 810 Gene3D Transferase(Phosphotransferase) domain 1 577 802 - -
Ahy20g3195 810 PANTHER OS10G0101000 PROTEIN 14 810 - -
Ahy20g3195 810 SMART serkin_6 502 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3195 810 PANTHER OS07G0415500 PROTEIN 14 810 - -
Ahy20g3195 810 ProSiteProfiles Protein kinase domain profile. 502 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g3195 810 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Ahy20g3195 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3195 Ahy-Chr20 142548522 142551835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3195 490 793 Receptor kinase-like Gene Family AT4G18250 41.100 1.70e-76 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy20g3195 Pkinase 2.70E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3195 - - ahf:112783437 1633.62