Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3194 ATGACAACCACACTCAGAAGATCGAAGCGTAAGCATAATCTTGAGCCAGCACCAAAAATCACTGGAAAGAAGCTTCGGTCAAACCTCCCTCGCCGGCGACGGTGCCAGATCTCACCGGTGGTTATTGTTTCCACTAGATTCAATGCTTCCAGAGAAAATCCTTGTTTCTCCGGAAAATCAATGGATTCTGATTCTTGCTCTGACGACTTTGCCGGCGGCGAAGCTTCGTGTAACTCGAGCAGAGCTTCCGCTGTTTTCGCCGGAAATGGAGGTTGCTCCAAATCGAGCGAGAAATTGCAATGCGAAATATCGAGAAATCGAAGATTCGGGAAGCAAAATGAAAGTGAAGTGTCGGAGTCTTCGTGTGTGGACTCCAATGACAGAGTTCGCGAACGGAGCAGGAGCTTGATTCTGAAGTTCAGAAGTGAAAAGGAGAGACGAAACGATGAATTCTCCGAAGCATGCACGAAATCTGAGATCACTTGCGAGGATGCAAAGTCCGGTAACCGAAATTTGAAAGCGTCGTCGGAAACGAAGAACAATCACGACGTCGTTTCGTTTAGCTCCTCTGGTGCTCGTGCGACGTCGTTTGAGGAGGGAAAGAGCATATCAATCTGCAAGATAAACAGAGAATCGGAATTAGAATTCTCTCAAGGTTCGAGAAACCACCGCGAGGATGATAGTAACTGTGTTGATTTGATAGCAAAATCGAAGATCAATCAAAGTACGAATAGCTCCGATCTCAATTGCACGGAGCAATTGCGATTCTCATATTCCAACGAAGACGAAGATGACGAAGACGATGAGTCAGAGTACTATTCGAGTCAGGGAACTGTGCTCTCCGATCTTCGCTCAGAGATGTTCAGCTTCCCTGAGTGTTCAGAACTTGAGCTTTCTGATTACACTCCGTCGCTATTCATTGATTCAGGAAGCCAATTCTCGCAGGGATCCGTTGGTGAAACTCCTTCTCCAACTCACTCGTTATTTCTTCAGTTCCGTAACGAGTTCACCACGCTAATTATAACTTCTCCATTCAACAATAATTCTTCCAGCGTCAAAGATGAGGTCGTTCCTATTCATTCCAAGTTTGTGAAGTTCGATGATTTGGACGAAGAAGAAAGCTACCTGATGCTGAGAGAGAGGGAGAGGAAGCAAGTTCTTCTGTGGAATTATACAGATAGCTATTTTTCTACCACTGAATTCGGGGACCTCGTGATTCAGCAACGCTCTCAAATGGTACACTGGATCGTTGAGGTTAGTTTTTTTTTTGTTTTGTTTTTTGGTATTACACTTATGTTATTTGAAGTTTTGAACATCATATCTGAAAAAAATGCTTTAACTAAGAAATTTTCCATAAATGGGCAGCAATCTTATCGAAAACAGCTTCGGCAAGAGACGATGTTTCTTGGAGTCAGCCTCCTTGACCGTTTCTTAAGCAAAGGATATTTTAAAGTCAAGAGAAACCTTCAGATTGTTGGGATCGCTTGCCTCACGTTAGCCACGAGGATCGAAGAAAACCAGCAATATAGCAGAGTGGAGCAAAAGAATTTTTATATTGGAAGTAATGTGTACAGTAGATGCGAGGTGGTTGCTATGGAATGGGTGGTGCAGGAAGTGCTTAAGTTCCAGTGTTTCATTCCGACCATCTACAACTTCTTGTGGTTCTACTTAAAAGCTGCTAAAGTTAATGCAGCTGTGGAGAGGAGGGTCAAGTCGCTGGCAGTTCTGGTACTATCAGCTGAGGAGCAGCTATGCTACTGGCCCTCAACAGTTGCTGCAGCAATTGTAATCCTGGCTTGTCTCGAAGTGGATCAAAATGCCTTCCACAGAGTCATAGGGATGCACGTAAGATCAAAAGATGAGAATTTGCATGAATGCATGCAGGTATGGTAA 1893 0.4406 MTTTLRRSKRKHNLEPAPKITGKKLRSNLPRRRRCQISPVVIVSTRFNASRENPCFSGKSMDSDSCSDDFAGGEASCNSSRASAVFAGNGGCSKSSEKLQCEISRNRRFGKQNESEVSESSCVDSNDRVRERSRSLILKFRSEKERRNDEFSEACTKSEITCEDAKSGNRNLKASSETKNNHDVVSFSSSGARATSFEEGKSISICKINRESELEFSQGSRNHREDDSNCVDLIAKSKINQSTNSSDLNCTEQLRFSYSNEDEDDEDDESEYYSSQGTVLSDLRSEMFSFPECSELELSDYTPSLFIDSGSQFSQGSVGETPSPTHSLFLQFRNEFTTLIITSPFNNNSSSVKDEVVPIHSKFVKFDDLDEEESYLMLRERERKQVLLWNYTDSYFSTTEFGDLVIQQRSQMVHWIVEVSFFFVLFFGITLMLFEVLNIISEKNALTKKFSINGQQSYRKQLRQETMFLGVSLLDRFLSKGYFKVKRNLQIVGIACLTLATRIEENQQYSRVEQKNFYIGSNVYSRCEVVAMEWVVQEVLKFQCFIPTIYNFLWFYLKAAKVNAAVERRVKSLAVLVLSAEEQLCYWPSTVAAAIVILACLEVDQNAFHRVIGMHVRSKDENLHECMQVW* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3194 630 PANTHER CYCLIN-SDS 1 627 - -
Ahy20g3194 630 CDD CYCLIN 546 600 IPR013763 -
Ahy20g3194 630 PANTHER CYCLINS 1 627 IPR039361 -
Ahy20g3194 630 MobiDBLite consensus disorder prediction 1 21 - -
Ahy20g3194 630 Gene3D - 393 540 - -
Ahy20g3194 630 CDD CYCLIN 457 533 IPR013763 -
Ahy20g3194 630 Pfam Cyclin, C-terminal domain 547 628 IPR004367 -
Ahy20g3194 630 Gene3D - 541 630 - -
Ahy20g3194 630 SUPERFAMILY Cyclin-like 546 628 IPR036915 -
Ahy20g3194 630 Pfam Cyclin, N-terminal domain 459 543 IPR006671 -
Ahy20g3194 630 SUPERFAMILY Cyclin-like 372 543 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3194 Ahy-Chr20 142542065 142547562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3194 461 606 Core Cell Cycle Gene Families AT5G25380 35.762 4.63e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3194 K21777 - gmx:100817658 617.846