LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy20g3180	ATGCTTATAGTTAAAATTATACAAAAGGATATGGCACCTCAATTGGTAGCAGCCTCCTGTGGCTTATCTTCTTCACATCTTTGCCATCCTCATGTTCCTCCTATCAGGAGTAGAGTTTTGAGTCCAAAAGGCACTGCAATCAACTTGAAAAAGAATCATGGCATGTCTCTTCCAGCCATTTCTTTGGGAAGAACGTATATCCCATTGTTGACTGCTGTTCCAAGGAAAACAGTTAAGCCATCACTGACTGCTGCTTCAGGAAAAACATATGCCACACTGACAGCTGATTCATCCACACTATTTTCCGGTGACCTAGATCATCTCACACTCAAAGCTCCTACATCTCGTGGATCCAATTCTAAGATCCGTGGTCAAGCATACATATATCATTCTTCTGGCTTTCGAATCCCTGCAAATGCAGAGAAGCCAGAATGGTGGTGGAGGACACTATGTTGTATTCCCTATCTAATTGCATTGCAGATGTCTGCAACTGGGTTTTATCTTGAACCTTTACTCGAAAAATTCCCACTTTTCCAAAATCTGATCTACTATATCCCCGGAGCCGTCAACAGACTACCAACCTGGTTCCCCATACTCTATTGCTATTTGGCCATCATTGGAGTTGTAAAGAACAGTAGATTTCCCCTTCTCTTCAGGTACCATGTAATGATGGGAATGCTACTCGAAATCGCGCAGCAGATATTCTGGGTCACGTGCAACTTCGTGCCACTTATACACTTCAAAGGGACACTTGGTATGTATTATTGGGGTGGTGTGGCTTTGGCATATATTCTCATATTGGGAGAGTGTATAAGGTGTGCACTTCTGGGTACCTTTGTGAAGATCCCTGTTATTAGTGAATCAGCATTCATTCATTCTCTATATGGTTTAGGATTAAGGTAG	903	0.423	MLIVKIIQKDMAPQLVAASCGLSSSHLCHPHVPPIRSRVLSPKGTAINLKKNHGMSLPAISLGRTYIPLLTAVPRKTVKPSLTAASGKTYATLTADSSTLFSGDLDHLTLKAPTSRGSNSKIRGQAYIYHSSGFRIPANAEKPEWWWRTLCCIPYLIALQMSATGFYLEPLLEKFPLFQNLIYYIPGAVNRLPTWFPILYCYLAIIGVVKNSRFPLLFRYHVMMGMLLEIAQQIFWVTCNFVPLIHFKGTLGMYYWGGVALAYILILGECIRCALLGTFVKIPVISESAFIHSLYGLGLR*	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy20g3180	300	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	82	298	IPR005691	-
	Ahy20g3180	300	Pfam	Chloroplast import apparatus Tic20-like	122	289	IPR005691	-
	Ahy20g3180	300	PANTHER	PROTEIN TIC 20-IV, CHLOROPLASTIC	82	298	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy20g3180	Ahy-Chr20	142446012	142448782	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy20g3180	34	298	Chloroplast and Mitochondria Gene Families	AT4G03320	44.195	4.35e-74	227

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy20g3180	-		-	ahf:112782565	615.15