Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3172 ATGGCTACCCTTATTGTTTTCACCCAACCATCTCCTGTTGAAGATGCTGAGGCTCTACATAAGGCTTTCAAAGGATGGGGAGCTGATGATAAGACCATTATAGCAATTCTTGGACACAGAAATGTTCATCAGAGGCAGCAAATCAGAAAAGCTTATGAGGAGCTTCACCAAGAGGATCTCATTAAGCGACTCGAATCCGAGATCTCTGGTGACTTTGAGAGAGCTATGTATCGTTGGATGTTGGAACCTGCTGATCGAGATGCTGTTCTAGCGAATGTAGCAATCAGAAATGGGAAGAAAGATTTTCATGTAATTGCGGAAATCGCTTGTGTTTTATCTGCTGAAGAGCTTTTGGCAGTGAGGCGTGCCTATCGCCACCGCTACAAGCGTTCCTTGGAAGAAGATGTGGCTGCTAACACCACTGGCCACCTTCGCGAGCTTTTGGTTGGATTAGTAAGCTCATTTAGGTATGAGGGTGATGAGATAAATGCAAGACTTGCACAGAGTGAAGCCAATATTCTCCATGAAACTGTGAAAGAGAAGAAAGGAAACTATGAAGAAGCCATTAGGATTCTTACTACAAGAAGCAAGACTCAGCTTGTTGCTACTTTCAACCGCTACAGAGATGAGCATGCCATTTCCATCAGCAAGAAATTGCTAGACAATCAAGCTTCTGATGATTTCTACAAGGCATTGCACACTGCAATTCGTTGCATCAATGACCACAAAAAGTACTATGAAAAGGTTCTGCGCAACGCGATAAAAAAGGTTGGGACCGACGAGGATGCGCTGAGCCGAGTCGTGGTGACAAGGGCTGAGAAGGATCTTAGGGACATCAAAGAACTGTATTACAAGAGAAACAGTGTTCATCTTGAGGATGCTGTTGCCAAAGAAACTTCAGGGGACTACAAGAAGTTCCTTCTCACATTGTTGGGAAAACAGGACTGA 948 0.4409 MATLIVFTQPSPVEDAEALHKAFKGWGADDKTIIAILGHRNVHQRQQIRKAYEELHQEDLIKRLESEISGDFERAMYRWMLEPADRDAVLANVAIRNGKKDFHVIAEIACVLSAEELLAVRRAYRHRYKRSLEEDVAANTTGHLRELLVGLVSSFRYEGDEINARLAQSEANILHETVKEKKGNYEEAIRILTTRSKTQLVATFNRYRDEHAISISKKLLDNQASDDFYKALHTAIRCINDHKKYYEKVLRNAIKKVGTDEDALSRVVVTRAEKDLRDIKELYYKRNSVHLEDAVAKETSGDYKKFLLTLLGKQD* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3172 315 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 Gene3D Annexin 243 313 IPR037104 GO:0005509|GO:0005544
Ahy20g3172 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 ProSiteProfiles Annexin repeat profile. 165 237 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 Gene3D Annexin 3 81 IPR037104 GO:0005509|GO:0005544
Ahy20g3172 315 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Ahy20g3172 315 PANTHER ANNEXIN 8 315 - -
Ahy20g3172 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Ahy20g3172 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Ahy20g3172 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Ahy20g3172 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Ahy20g3172 315 PANTHER ANNEXIN 8 315 - -
Ahy20g3172 315 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 Gene3D Annexin 165 240 IPR037104 GO:0005509|GO:0005544
Ahy20g3172 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Ahy20g3172 315 PRINTS Plant annexin signature 160 180 IPR009118 -
Ahy20g3172 315 PRINTS Plant annexin signature 226 244 IPR009118 -
Ahy20g3172 315 PRINTS Plant annexin signature 118 132 IPR009118 -
Ahy20g3172 315 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Ahy20g3172 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 Pfam Annexin 94 151 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 Pfam Annexin 170 233 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Ahy20g3172 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3172 Ahy-Chr20 142384143 142390346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3172 K17098 - gmx:100806472 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3172 20 142384143 142390346 Ahy20g3172 20 142384143 142390346 ECH
Ahy20g3172 20 142384143 142390346 Ahy10g2612 10 115635066 115638164 hybridization