Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3170 ATGTTTGATTGGAACGACGAAGAGCTTGCTAACATAATATGGGGTGAAGCTGGTGAGAATGATGATCATATTGTGCCCTATCCAGAGGGAAGTGAAGATCTTAGCAACAAGAAAGAATGGAATCAAGAAGCTGGGACAAAGTTGAATGAGCAGAAGAAACCTGAGGATAAAACAAATTTTCATGAAAGAAAGATAGGAAGCAGTTCCAACCATGATACTGGTGGAGGACTATCTGGCTCAGGCTATGGAAAAGACTCATGGCCCGACCTGTCTTTATCCACTGTAGATAAAATTGATCAGGGCTCTCTGGGTACTGAAGTATCTAAAAATTTAAGTGAACTAGGCAAATTCAGTTGCTCGAGAGAAGAGACTACACAGCTTGATAAGGATGCAGAAGTTTTCCAAAATGCTAATGAAGGTAAAGAGCAAGGTGACTTTGTGGATTATGGCTGGGCTAACATAGGCAGTTTTGATGACCTTGATCGAATTTTCAGCAATGATGACCCTATATTTGGCAATGTAACTCTTGATAATTCTGATGAGCTTTGGTCCTCTAAAGATGTGAATAACAGTCCAGCACCCATACCAGTAGATGCACCAAGTCCAGCTGGATCTTTAAGGAACAGATCTGAGCCTTTGGAAATTAAAGAAGAACATGCTCAATGCAATGATCAAACATTTTCTCTCAGTTACGGGAAGGTTGGTGGTGCTGCATCTAAGGATTTACAAAATTCTTGTGCAACTACAGTTGATGTGGGATCTGCTGGAGGTGGATGTAAGCCAACTGGAAAGGATCAGCAGCCCCTGAAGCAGAAAAATTCGTTGAAAGCTCGGAAAAGTTCACAGGTGAAACAAGAGGGGAAAGCATTGCATGGCCCTTATGGTAACTGGTCGTCTTCAGGAAGGATGGCAAGACAATTTGAGAATCAGTTGGCACCTTCTGTCATGCAACCTTCTCCCTCTTCAATTCTTGGTCAACAGAAGCATCTTCAAGGACCTCAAACACTATACCAGAACATGATGAATCCATATGTTGCATCACCTGTGTACGGGAACCTTACTAATACATATGCTGGTATGCCAATGCTATCACAGACCCAACCAGGAGATCCTAGATGTCAGCCTGTTCTTTCTGGGTATGAAGTGTCTCCTGGTATAATGAATCCTGTGAAGAAGTCTGTGGACTCGGTCAAGCCTCAAACCATGACCCCTCAGGAGAAAATTGAAAAGTTGAGGAGGCGACAGCAAATGCAGGCAATGCTTGCTATTCAGAAACAAAGACAACAGTTGGGTCATCAAGTTCCTAGCACTAATAAATCCATCACTCAAAAGTCTCCCATGGAAAACCAAAGTACTCTCAGTGATGGAACCGATTTAGAAAATGAAGATTTAACTCTGCCTTCTCTTGATCCCCCGATTGAACAAGATGATTCTAATACAGTCTCTGCAGCAGTTGATAATGATTTTGTTGAAGATGCCATACTGTACAAGCTTCAGGATATAATATCTAAGTTAGACATCCAAATAAGACTCTGCATCAGAGACAGCTTGTTCCGTTTGGCACAGAGTGCAATTCAAAGGCATTATGCCAGTGATACTAGCAGCACTAACAAAAGTAGCAGAGAAGAACTTGAAGTCATTGCAAGAGAAGAAAAAAACACCCAAAGCAGATATCCCAGGGTCCCTGATGTTGAAACACAGACGAATCCTATTGATCGAACTGTGGCTCATCTTCTCTTTCATAGTCCTCCGGACTTAGCTGCAAACTATTCGGATAAACTGGACTCGCCGATGTCTTCGAAGGTTCATTTTGAAAGCAAAGCAGCTAACATGGTGAATTTTCCTGTGACTAGCTTGCCAGACGAGGGCTTGAAAAGTAATCAACAAATGCCTCACCCGGAGTTCAAGAATTCTTGGTCATTATTTGAGGCTCAGTCTATGGATCAAATAAAAAACAGTCCTTGCTTGGACACTTCCGAGAATGCATCAAACACGCAGGAGCTCGAAGCCTCTCAGTGA 2019 0.424 MFDWNDEELANIIWGEAGENDDHIVPYPEGSEDLSNKKEWNQEAGTKLNEQKKPEDKTNFHERKIGSSSNHDTGGGLSGSGYGKDSWPDLSLSTVDKIDQGSLGTEVSKNLSELGKFSCSREETTQLDKDAEVFQNANEGKEQGDFVDYGWANIGSFDDLDRIFSNDDPIFGNVTLDNSDELWSSKDVNNSPAPIPVDAPSPAGSLRNRSEPLEIKEEHAQCNDQTFSLSYGKVGGAASKDLQNSCATTVDVGSAGGGCKPTGKDQQPLKQKNSLKARKSSQVKQEGKALHGPYGNWSSSGRMARQFENQLAPSVMQPSPSSILGQQKHLQGPQTLYQNMMNPYVASPVYGNLTNTYAGMPMLSQTQPGDPRCQPVLSGYEVSPGIMNPVKKSVDSVKPQTMTPQEKIEKLRRRQQMQAMLAIQKQRQQLGHQVPSTNKSITQKSPMENQSTLSDGTDLENEDLTLPSLDPPIEQDDSNTVSAAVDNDFVEDAILYKLQDIISKLDIQIRLCIRDSLFRLAQSAIQRHYASDTSSTNKSSREELEVIAREEKNTQSRYPRVPDVETQTNPIDRTVAHLLFHSPPDLAANYSDKLDSPMSSKVHFESKAANMVNFPVTSLPDEGLKSNQQMPHPEFKNSWSLFEAQSMDQIKNSPCLDTSENASNTQELEASQ* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3170 672 MobiDBLite consensus disorder prediction 426 479 - -
Ahy20g3170 672 MobiDBLite consensus disorder prediction 250 300 - -
Ahy20g3170 672 MobiDBLite consensus disorder prediction 184 208 - -
Ahy20g3170 672 MobiDBLite consensus disorder prediction 650 672 - -
Ahy20g3170 672 PANTHER PROTEIN LNK1 2 632 IPR039928 GO:0006355|GO:0007623
Ahy20g3170 672 PANTHER PROTEIN LNK2 2 632 - -
Ahy20g3170 672 MobiDBLite consensus disorder prediction 22 68 - -
Ahy20g3170 672 MobiDBLite consensus disorder prediction 13 83 - -
Ahy20g3170 672 MobiDBLite consensus disorder prediction 426 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3170 Ahy-Chr20 142358824 142366346 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3170 - - gmx:100800977 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3170 20 142358824 142366346 Ahy20g3170 20 142358824 142366346 ECH
Ahy20g3170 20 142358824 142366346 Ahy10g2610 10 115590877 115598407 hybridization