Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3166 ATGATTGGGGAAGTAACCTTCGCTTGCTACTGTTTCTTCTGCTTTGCTGTTAATTTAATGCACTGCGAGGTTAAATTTGGCATCAAAATGCCAGATGTTCAGGCCCTTGTCAATGATTTTGTCAATCAACTTAAAAAACGTAAAATTGAAGGGTCTCAGGCCACAGCAAAGCAGACAGCGGAGGTGCTTCGGTCTGTGATTTCGCAGCAGCGCGTGCCACACACGAACCAGGCTGCAGCTTTGATTAATGCAGTAAGGGCAGTTGGGGAGCAGCTTATTGCTGCAAATCCTGTTGAGCTAGCAGTGGGAAATATTGTGAGGCGTATTTTACACATTATAAGGGAGGAGGATCTTTCCCTTGCAACAGCTGCTATGGCTGGCTTGGGGCTGTCAGTTGCTAGTGATGATGAAGATGACATGGAGCGAAGTGACCAGCCCATTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCATCCTTGCAAACTCTTCTAGAGGATATGCCTGATTCAGCTGCTGTTCCACACACGTCTTCCTCAGGGGGTGATTCTGAAGGGAAAAGCAGATCGGTTGACAAAGGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTTATTCAGGACATATCCACTTGCTATGAACAAATAGCTGAGCAAGCAATAGAGCACATTCATCAAAATGAGGTAATATTGACCCTGGGCAGTTCAAAAACTGTGCTGGAATTTCTCTGTGCTGCAAAGGAAAAAAAGAGATCATTTAAGGTCTTTGTTGCCGAGGGTGCACCAAGATATCAAGGGCACCTCCTTGCAAAAGATTTGGCTGCTAGAGGCTTACAAACCACAGTAATTACTGATTCAGCAGTTTTTGCCATGATTTCCCGAGTTAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTGATCGCCCCGGTTGGTTTGAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTCGTACTTGCTGGGAGTCACAAGCTGTGCCCTTTGTATCCGCACAATCCTGAAGTCCTACTGAATGAGCTGAGATCCCCATCTGAGCTGCTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCTAGTGGCGCTGGCTCTCTTCACATTGTTAATCCAACGTTTGATTATGTGCCACCTAAACTTGTTAGTTTGTTTATTACTGACACTGGAGGGCATAACCCGTCCTATATGTACCGACTCATAGCGGATTACTACTCGGCTGATGATCTGGTGGTGAAAGGAAGGCCTACTACAGGAAGTTGA 1335 0.4592 MIGEVTFACYCFFCFAVNLMHCEVKFGIKMPDVQALVNDFVNQLKKRKIEGSQATAKQTAEVLRSVISQQRVPHTNQAAALINAVRAVGEQLIAANPVELAVGNIVRRILHIIREEDLSLATAAMAGLGLSVASDDEDDMERSDQPILSAAAVAAAARSTLRPPSLQTLLEDMPDSAAVPHTSSSGGDSEGKSRSVDKGSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAIEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKDLAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHIVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKGRPTTGS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3166 444 Gene3D - 223 428 IPR042529 -
Ahy20g3166 444 MobiDBLite consensus disorder prediction 176 203 - -
Ahy20g3166 444 PANTHER BNAA01G32370D PROTEIN 33 83 - -
Ahy20g3166 444 PANTHER BNAA01G32370D PROTEIN 84 436 - -
Ahy20g3166 444 SUPERFAMILY NagB/RpiA/CoA transferase-like 35 433 IPR037171 -
Ahy20g3166 444 Pfam Initiation factor 2 subunit family 48 418 IPR000649 GO:0044237
Ahy20g3166 444 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 33 83 - -
Ahy20g3166 444 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 84 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3166 Ahy-Chr20 142336186 142341860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g3166 30 436 Eukaryotic Initiation Factors Gene Family AT3G07300 83.130 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3166 K03754 - gmx:100778545 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3166 20 142336186 142341860 Ahy20g3166 20 142336186 142341860 ECH